Pairwise Alignments

Query, 1036 a.a., Cation/multidrug efflux protein from Sinorhizobium meliloti 1021

Subject, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

 Score =  235 bits (600), Expect = 1e-65
 Identities = 230/1021 (22%), Positives = 442/1021 (43%), Gaps = 59/1021 (5%)

Query: 14   AVTLFFIVLLAAAGVYAFMSLGRAEDPSFTIKTLTVTTVWPGATAREMQDLVAEPLEKRI 73
            AV++ F+++L   G+ A   +   E P  T   +TV+T + GA+A  +Q  + +PLE+ +
Sbjct: 14   AVSISFLIVLL--GLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQGFITQPLEQAV 71

Query: 74   QELTWYDRVETTTRPGYAFLTVTLKDSTPPTAVEEEFYQARKKLGDEARNLPSGVFGPFV 133
             +    D + + +  G + +TVT+K +T P A   +      K       LP     P V
Sbjct: 72   AQADNIDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLA---KTNSVRSQLPKEAEDPTV 128

Query: 134  NDEYSDVSFALYALKAKGMPMRELVRQA------EVIRQDLLHVPGVKKINILGERPEQI 187
                   +  LY     G    EL           V+   L  V GV  I++ G     +
Sbjct: 129  TMSTGSTTAVLYI----GFTSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGMKYAL 184

Query: 188  FVEFSYAKLATLGISAQDIAAALQRQNTVTPAGSIDTRGPQVFIRFDGA----YNSVQAI 243
             V    AK+A L +SA D+ + L   N  +  G         F+ ++G+     ++V+ +
Sbjct: 185  RVWLDPAKMAALNLSAADVMSILNANNYQSATGQAIGE----FVLYNGSADTQVSTVEDL 240

Query: 244  AATPIVAA-GRTLKLSDFAEVRRGYEDPATYIIRHEGEPAIMLGAVMQQGWNGLELGKAL 302
             +  + A  G   +L D A+V    +   TY     G  A++         N + + K +
Sbjct: 241  ESLVVKAEKGTVTRLGDIAKVTLA-KSHDTYRASANGREAVVAAINAAPSANPINIAKDV 299

Query: 303  EERSAAIARTLPLGMTLAKVSDQAVNIDAAVGEFMLKFAMALGVVLLVSLLSLG-WRVGI 361
             E    + + +P  + +  + D  V I+ ++ E +     A  +VL+V  L LG  R  +
Sbjct: 300  LEMLPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAVL 359

Query: 362  VVALAVPLTLAVVFLIMLETGRFFDRITLGALILALGLLVDDAIIAIEVMVVKMEEGMDR 421
            +  + +PL+L  V ++M   G  ++ +TL A++LA+GL+VDDAI+ +E +   ++EG   
Sbjct: 360  IPIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGESP 419

Query: 422  IKAAAYAWSHTAAPMLSGTLVTIIGLMPVGFARSTAGEYAGNIFWVVGFALIVSWVVAVI 481
             +AA       A P+++ TL       P+       G         +  ++ VS +VA+ 
Sbjct: 420  FRAAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVALT 479

Query: 482  FTPYLGVKML-----PDIKPVEGGHHAIYDTPNYRRLRGIIEFAVRHKYVTCAVVGIVMA 536
             +P +  KML     P+   ++  H     T  Y R+   +   + H+ V  A   IV A
Sbjct: 480  LSPMMCSKMLKANEAPNKFELKVHHLLDRMTARYERM---LTAVMAHRPVVIAFAFIVFA 536

Query: 537  LSVVGMGGVKHQFFPTSDRPEVLVEVRMPEGASIETTIATVEKLERWLQEQPEADILTSY 596
               +    +  +  P+ D+  +++    P  A+++    T++ + + L +QPE      +
Sbjct: 537  SLPMLFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKILSDQPEVQFAQVF 596

Query: 597  IGQGAPRFFFAMAPELPDPAFAKIVVLTPDSHAREALKLRLRAAVSDGLVPEGYVRVTQL 656
             G       F +A  +P          +    ++  +  R+   V D  +P   V   Q+
Sbjct: 597  TGVPNSNQAFGIASMVP---------WSQREASQATVTNRVGTLVQD--IPGMAVTAFQM 645

Query: 657  --VFGPYTPFPVEFRIMGPDPAQ-LYQISEKALEIMKGVPDVRQANRDWGNRTPVLRFVP 713
              + G  +  P++F I  P   + L+ I+   L  +K  P    ++ D    +  ++   
Sbjct: 646  PELPGAGSGLPIQFVITTPSNFESLFTIATDVLTEVKANPMFVYSDLDLNFDSATMKINI 705

Query: 714  DQDRLNLIGLSPAEAAQQMQLLLSGIPVTQVRENIRNVPVVARSAGESRLDPARLADFSL 773
            D+D+    G++  +    +  +++   V ++  N R+  V+ +   + RL+P  +  + +
Sbjct: 706  DKDKAGAYGVTMQDIGITLSTMMADGYVNRIDLNGRSYEVIPQVERKWRLNPESMNSYYV 765

Query: 774  MSRDGRQVPLDQIGHSEIRFEEPILKRRDRTPVITIRSDINEATQPPEVSQQIMTALQPL 833
             + DG+ +PL  +   ++  E   L   ++    T    +     P       +   + L
Sbjct: 766  RAADGKVIPLGSLVTIDVVAEPRSLPHFNQLNSAT----VGAVPAPGTAMGDAINWFENL 821

Query: 834  IAS-LPVGYRIEMGGNIEESLKANVALVKIFPAMIAAMLIVIILQVRSLSTMTMVMLTAP 892
             +S LP GY  +  G   + +    AL   F   +A + +V+ +Q  SL    ++M++ P
Sbjct: 822  ASSKLPKGYSHDYMGEARQYVTEGSALYATFGLALAIIFLVLAIQFESLRDPLVIMVSVP 881

Query: 893  LGLAGVVPVLLLFNQPFGFNAILGLIGLAGILMRNTLILTEQIKENKAAG-LHDYHAVIE 951
            L + G +  L          + +GLI L G++ ++ +++ E  KE +    L    AV+ 
Sbjct: 882  LAICGALIALAWGTATMNIYSQVGLITLVGLITKHGILICEVAKEEQLHNKLSRIEAVMH 941

Query: 952  ATVQRTRPVILTALAAVLAFVPLTHSVFWG-----SMAYTLIGGTAVGTVMILLFLPALY 1006
            A   R RP+++T  A +   +PL ++   G     S+   ++ G A+GT+  L  LP +Y
Sbjct: 942  AAKVRLRPILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLPVIY 1001

Query: 1007 A 1007
            +
Sbjct: 1002 S 1002



 Score = 42.4 bits (98), Expect = 2e-07
 Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 8/160 (5%)

Query: 340  FAMALGVVLLVSLLSL-GWRVGIVVALAVPLTLAVVFLIMLETGRFFDRITLGALILALG 398
            F +AL ++ LV  +     R  +V+ ++VPL +    + +       +  +   LI  +G
Sbjct: 852  FGLALAIIFLVLAIQFESLRDPLVIMVSVPLAICGALIALAWGTATMNIYSQVGLITLVG 911

Query: 399  LLVDDAIIAIEVMVVK-MEEGMDRIKAAAYAWSHTAAPMLSGTLVTIIGLMPVGFA--RS 455
            L+    I+  EV   + +   + RI+A  +A      P+L  T   I GL+P+ +A    
Sbjct: 912  LITKHGILICEVAKEEQLHNKLSRIEAVMHAAKVRLRPILMTTAAMIAGLIPLMYATGAG 971

Query: 456  TAGEYAGNIFWVVGFA---LIVSWVVAVIFTPYLGVKMLP 492
             A  ++  I  V G A   L   +V+ VI++ YL  K  P
Sbjct: 972  AAQRFSIGIVIVSGLAIGTLFTLFVLPVIYS-YLAEKHKP 1010