Pairwise Alignments

Query, 1036 a.a., Cation/multidrug efflux protein from Sinorhizobium meliloti 1021

Subject, 1037 a.a., Acriflavin resistance protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  266 bits (679), Expect = 7e-75
 Identities = 248/1035 (23%), Positives = 458/1035 (44%), Gaps = 64/1035 (6%)

Query: 4    NLSALAVRERAVTLFFIVLLAAAGVYAFMSLGRAEDPSFTIKTLTVTTVWPGATAREMQD 63
            ++S+L +R         +LL   G+ A   L   E P      ++VTT + GA    +  
Sbjct: 2    DVSSLFIRRPVFATVLSLLLVVMGIAAMTRLAVRELPDIDSAVVSVTTPYTGAAPEIVDT 61

Query: 64   LVAEPLEKRIQELTWYDRVETTTRPGYAFLTVTLKDSTPPTAVEEEFYQARKKLGDEARN 123
             + E +E  +  ++    + + +R G     +  +      +++E     R  +     +
Sbjct: 62   DITEVIENAVAGVSGIRTITSQSRRGQGRTVIEFESGV---SMDEAVNDVRDAVAKVRGD 118

Query: 124  LPSGVFGPFV--NDEYSDVSFALYALKAKGMPMRELVRQAEVIRQDLLHVPGVKKINILG 181
            LP  +  P +  +D  SD    L     +  P+         I   L  + GV ++++ G
Sbjct: 119  LPDDIEEPRIAKSDTDSDPVMRLSLTSPRMTPIELTDFADRYIVDRLATIDGVAQVDLYG 178

Query: 182  ERPEQIFVEFSYAKLATLGISAQDIAAALQRQNTVTPAGSIDTRGPQVFIRFDGAYNSVQ 241
            ER + I +      +A   ++ QD+ AAL+R N   PAG I++    + +R      S +
Sbjct: 179  ERRQAIRLWLDRRAMAARQVTVQDVEAALRRANVELPAGEIESASRLLTVRAATLLTSPE 238

Query: 242  AIAATPI-VAAGRTLKLSDFAEVRRGYEDPATYIIRHEGEPAIMLGAVMQQGWNGLELGK 300
            A  +T I V  G  L++ D A V  G E+  T  +R EG  A+ +G + Q   N + +  
Sbjct: 239  AFGSTVIKVVDGYPLRVRDVARVELGVENDDT-TVRVEGRDALTMGVLRQSQANTVAISN 297

Query: 301  ALEERSAAIARTLPLGMTLAKVSDQAVNIDAAVGEFMLKFAMALGVVLLVSLLSLGW-RV 359
             +      +  +LP GM+L   SD A+ I+ ++ E +L   ++  +V++V+   LG  R 
Sbjct: 298  RIRAEIDRLRPSLPEGMSLEVSSDDALFINRSIHEVILTLGLSGLIVIIVNFAFLGSIRA 357

Query: 360  GIVVALAVPLTLAVVFLIMLETGRFFDRITLGALILALGLLVDDAIIAIEVMVVKMEEGM 419
             +V  + +P+ +   F+ +L  G   + +TL ALIL++GL+VDDAI+ +E +  ++E G 
Sbjct: 358  TLVPTVTIPVAVIGTFIGILLLGFSINLLTLLALILSIGLVVDDAIVVLENIQRRIEAGE 417

Query: 420  DRIKAAAYAWSHTAAPMLSGTLVTIIGLMPVGFARSTAGEYAGNIFWVVGFALIVSWVVA 479
             ++ AAA         +++ +L  I   +P+ F   T G       +V+  A+ +S +VA
Sbjct: 418  PKLVAAARGTRQVTFAVVATSLTLIAVFVPISFMEGTVGRLFTEFGFVLACAVAISMLVA 477

Query: 480  VIFTPYLGVKMLPDIKPVEGGHHAIYDTPNYRRLRGIIEFAVRHKYVTCAVVGIVMALSV 539
            +   P L   +L + K      HA+    NY         +  ++    AV+G+ M +  
Sbjct: 478  LTLCPPLAAGVLAEGKAEGRLAHAL----NY----AFGTLSRGYQRALSAVLGLPMVVLT 529

Query: 540  VGM----------GGVKHQFFPTSDRPEVLVEVRMPEGAS---IETTIATVEKLERWLQE 586
            V +           G+  +  P  DR  V+V +  P+GA+    +T I  VE   + + +
Sbjct: 530  VALLCGGASFWLYQGLPKELVPVEDRGVVVVSLNGPQGANTRYTDTQIRAVEAAVQPVLD 589

Query: 587  QPEADILTSYIGQGAPRFFFAMAPELPDPAFAKIVVLTPDSHAREALKL---------RL 637
            + EA  + + +GQ             P   +  I +   ++  R A  L         +L
Sbjct: 590  RGEAVGVLAQVGQW----------NRPHRGYVVIRLDDWENRGRTASALAESLRKDLGKL 639

Query: 638  RAAVSDGLVPEGYVRVTQLVFGPYTPFPVEFRIMGPDPAQLYQISEKALEIMKGVPDVRQ 697
              A +  +VP G       + G  TP  V   I GPD A++   +   L+  + +P +  
Sbjct: 640  AGATATPVVPAGLG-----LRGSRTPLQVV--IGGPDYAEVEVWANALLKRAEELPGLIN 692

Query: 698  ANRDWGNRTPVLRFVPDQDRLNLIGLSPAEAAQQMQLLLSGIPVTQVRENIRNVPVVARS 757
               D+    P L    D+DR + +G+      Q +Q +L+   VT+  +  R   VV ++
Sbjct: 693  PELDFEQNQPQLSVGIDRDRADDLGVGVEAIGQTLQTMLASREVTRFVDRGREYQVVVQA 752

Query: 758  AGESRLDPARLAD-FSLMSRDGRQVPLDQIGHSEIRFEEPILKRRDRTPVITIRSDINEA 816
              E R  P+ L++ F    + G  VPLD +   +     P L R  R P IT++S +   
Sbjct: 753  RPEDRRTPSDLSNTFVRAEKGGALVPLDALVILKETAGAPDLNRYARLPSITLQSALAPG 812

Query: 817  TQPPEVSQQIMTALQPLIASLPVGYRIEMGGNIEESLKANVALVKIFPAMIAAMLIVIIL 876
                ++ Q I   +     ++P   R+ + G  +E L+ +  ++  F   +  + +V+  
Sbjct: 813  Y---DMGQAIDDVMALASQTVPPEARLSLAGQSKEFLETSGGVLFTFLMALVIVYLVLAA 869

Query: 877  QVRSLSTMTMVMLTAPLGLAGVVPVLLLFNQPFGFNAILGLIGLAGILMRNTLILTEQIK 936
            Q  S     ++ML+ PL ++G +  L          + +G++ L G+  +N +++ E   
Sbjct: 870  QFESFLHPLIIMLSVPLAVSGALLSLWATGNSINVYSQIGIVLLIGLTAKNGILIVEFAN 929

Query: 937  ENKAAGLHDYHAVIEATVQRTRPVILTALAAVLAFVPLTHSVFWG-----SMAYTLIGGT 991
            + +  G     A++EA   R RP+++T +  +L  VPL  S   G     ++   +IGG 
Sbjct: 930  QLRDEGRSVREAILEAASLRLRPILMTVICTILGAVPLAWSSGAGAESREAIGIVVIGGL 989

Query: 992  AVGTVMILLFLPALY 1006
             + +++ L   P LY
Sbjct: 990  GLASLLTLFVTPVLY 1004