Pairwise Alignments

Query, 505 a.a., reverse transcriptase from Sinorhizobium meliloti 1021

Subject, 141 a.a., hypothetical transposase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 59.7 bits (143), Expect = 6e-14
 Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 14/114 (12%)

Query: 83  QADLRSGAYRPSPARRKLIPKAGKPGQFRPLGIPTIRDRVVQGAAKILLEPIFEAQFWHV 142
           ++ L  G Y+PS  RR  I K    G  R LGIP + DRV+Q +   +L P+F+  F   
Sbjct: 19  KSQLELGEYQPSAVRRVEIDKPD--GGKRKLGIPNVIDRVIQQSIAQILTPLFDPFFSAN 76

Query: 143 SYGFRPGRNTHGALEYIRRAALPQKRDEDTRRNRLPYPWVIEGDIKGCFDNINH 196
           S+GFRP RN   A+  +R               +L   + ++ D+   FD +NH
Sbjct: 77  SFGFRPNRNAKQAVLQVRDII------------KLKRKFAVDVDLSKFFDRVNH 118