Pairwise Alignments

Query, 287 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

 Score =  137 bits (345), Expect = 3e-37
 Identities = 84/271 (30%), Positives = 146/271 (53%), Gaps = 11/271 (4%)

Query: 20  YRFNIVGMVGLSIILCWALVAIFAPLIIPYPVGEIVDLDYFGPM-----SRDFWLGSDYL 74
           +R N + M GL  +L  ALV I +P I PY       +    P      + D++LG+D L
Sbjct: 23  FRANNLAMFGLWSLLFIALVTILSPWIAPYDPQMHSSVLLLPPSWEPEGTVDYFLGTDDL 82

Query: 75  GRDMLSRILMGARYTVGISLAAVTIACFSGVVLGMIAAVAGGWLDTLLSRLLDALNSIPS 134
           GRD+LSR++ G+ +++G ++    IA   G  +G +A +  G L + L+ +LD + SIPS
Sbjct: 83  GRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLNHILDTVMSIPS 142

Query: 135 KLFGLVVVAAVGSSIPVLILTLSVIYIPGAYRFARALAVNIN---AMDFITVARIRGEST 191
            L  ++ VA +G+    ++L + +  IP   RF R++ V ++     D++  AR+ G + 
Sbjct: 143 LLLAIIFVAFLGAGEFNILLAIGLALIP---RFIRSVYVAVHNEVEKDYVMAARLDGANE 199

Query: 192 LYLIRSEILPNIIGPVLADLGIRFVFIVLLLSGLSFLGLGVQPPYADWGALVRENIGGLP 251
            YL+   I PNI+  ++A++ +     +L ++ L FLGLG Q P  +WGA++ +++  + 
Sbjct: 200 FYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWGAMLGDSVELIY 259

Query: 252 FGAPAVIFPSFAIASLTISVNLLIDNLPQKI 282
                V  P  AI    + +NL+ D   Q +
Sbjct: 260 IAPWTVTLPGLAIMFTVVVINLVGDGARQAL 290