Pairwise Alignments

Query, 374 a.a., acetylornithine deacetylase from Sinorhizobium meliloti 1021

Subject, 384 a.a., succinyl-diaminopimelate desuccinylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  100 bits (249), Expect = 7e-26
 Identities = 98/325 (30%), Positives = 150/325 (46%), Gaps = 25/325 (7%)

Query: 48  DRSNIFATIGPKEARGYIISGHMDVVPAAETG-WTSDPFRLRVEADRLYGRGTTDMKGFL 106
           D +N++A  G      +  +GH DVVP  +   W + PF   +    LYGRG  DMKG L
Sbjct: 55  DTTNMWARRG-NTGPVFCFAGHTDVVPTGDLSRWHTPPFEPTIIDGYLYGRGAADMKGSL 113

Query: 107 AAVLAAVPKLAAMPLRRPLHLA--LSYDEEAG-CRGVPHMIARLPELCRQPLGAIIGEPT 163
           AA++ A  +  A     P  +A  ++ DEE     G   +I  L     +   A++GEP+
Sbjct: 114 AAMVVATERFVAKHPNHPGSIAFLITSDEEGPFINGTTRVIDTLEARNEKITWALVGEPS 173

Query: 164 GMRAI-----RAHKGKAAARLTVRGRSGHSSRPDQGLNAIHGVAGVLTQAVAEADRLVGG 218
               +        +G   A LTV+G  GH + P    N IH  A  L + +++     G 
Sbjct: 174 STLKLGDVVKNGRRGSLTANLTVKGVQGHVAYPHLADNPIHKAAPFLAE-LSQTHWDNG- 231

Query: 219 PFEHVFEPPYSSLQIGTVKGGQ-AVNIIPDSCEVEFEARAISGVDPAELLAPVRKTAEAL 277
              + F PP +S+QI  + GG  A N+IP + EV F  R  + V  AE+L    +T    
Sbjct: 232 ---NAFFPP-TSMQIANINGGTGASNVIPGALEVMFNFRYSTEV-TAEILIERVETLLTA 286

Query: 278 TTLGFEVEWQELSAYPALSLEP---DAPLAALLEELTGREALPAVSYGTEAGLF-QRAGI 333
             L +++ W   +  P L+ E    DA   A + ++TG +  P  + GT  G F    G 
Sbjct: 287 HELDYDIRW-TFNGLPFLTGEGPLLDATRHA-IRQVTGYDTDPQTTGGTSDGRFIAPTGA 344

Query: 334 DAIICGPGDIGRAHKPDEYILIDEL 358
             +  GP +    HK +E + +D+L
Sbjct: 345 KVLELGPVN-ATIHKVNECVKVDDL 368