Pairwise Alignments

Query, 383 a.a., transcriptional activator from Sinorhizobium meliloti 1021

Subject, 311 a.a., Transcriptional regulator, LysR family from Xanthomonas campestris pv. campestris strain 8004

 Score =  169 bits (429), Expect = 7e-47
 Identities = 99/253 (39%), Positives = 144/253 (56%), Gaps = 1/253 (0%)

Query: 1   MGDLSDIRVFLAVAQQRSFTAAARQLSMTPPTVTRSVSALEQSLGVQLLLRTTRQVSLTS 60
           M  L  +RVF+AVA++  F+AAA  L  +   +TR V+ALEQ LG +LL RTTR+VSLTS
Sbjct: 1   MDTLDAMRVFVAVAERSGFSAAADALDRSTANITRQVAALEQRLGTRLLNRTTRRVSLTS 60

Query: 61  AGAVYAARVEPLIRQFDQVRDDLREEQGDVAGLIRINAPLSLGQQLLPDIVSGFRAEHPQ 120
           AG  Y  R   L+   D +   +  +    +GL+R+NAP+S G   L  ++ GFRA  PQ
Sbjct: 61  AGTAYYQRCLQLLADLDDLEATVGAQALAPSGLLRVNAPVSFGIVQLAALLPGFRARFPQ 120

Query: 121 VSVSLSLTDRFIDIVSERFDLALRVSEAPRDRSTIWRKVCRVRRILVASPGYLAIFGTPE 180
           V + LSL+DR +D+V E FD+ALR++  P   + I R++  VR +  A+P YLA  GTP+
Sbjct: 121 VELDLSLSDRLVDMVEEGFDVALRITRQPAP-TLIARQLGTVRLVPCAAPAYLARAGTPQ 179

Query: 181 TPDDLSRHGCIAYDEEAISETWELTNGGRTRKALAGKVLAANNGELIAKLVEDGQGLALL 240
            P DL+ H C+ Y      +                  L ANNG +++     GQG+ + 
Sbjct: 180 HPADLAGHECLLYHYAPTGDDVRFHGPDGDIDVRLRGGLRANNGHVLSAAAVAGQGVVIQ 239

Query: 241 PHFIVGDALASAR 253
           P F+  + +A+ R
Sbjct: 240 PDFLADEHIAAGR 252