Pairwise Alignments

Query, 383 a.a., transcriptional activator from Sinorhizobium meliloti 1021

Subject, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  135 bits (341), Expect = 1e-36
 Identities = 83/256 (32%), Positives = 136/256 (53%), Gaps = 6/256 (2%)

Query: 1   MGDLSDIRVFLAVAQQRSFTAAARQLSMTPPTVTRSVSALEQSLGVQLLLRTTRQVSLTS 60
           M   +D+ +F ++ + +   AA R+LS++P TVT  + ALE   GV+LL R+TR +SLT 
Sbjct: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60

Query: 61  AGAVYAARVEPLIRQFDQVRDDLREEQGDVAGLIRINAPLSLGQQLLPDIVSGFRAEHPQ 120
           +G +Y      ++    +  + L+    +V G ++++AP  +G+Q +  I++ F  ++P+
Sbjct: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120

Query: 121 VSVSLSLTDRFIDIVSERFDLALRVSEAPRDRSTIWRKVCRVRRILVASPGYLAIFGTPE 180
           V   L L D   ++     D+ +R  E   D S I RK+   RR+L ASP YLA  G P+
Sbjct: 121 VVPYLYLNDNISNLAESGLDVVIRYGEL-ADSSLISRKLATSRRVLCASPAYLARKGIPK 179

Query: 181 TPDDLSRHGCIAY---DEEAISETWELTNGGRTRKALAGKVLAANNGELIAKLVEDGQGL 237
           TP DL++H C+A    +EE   +TW      + +         A++GE+I +    G G+
Sbjct: 180 TPQDLAQHDCLAMVRSNEE--MKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGI 237

Query: 238 ALLPHFIVGDALASAR 253
           AL     V D L   R
Sbjct: 238 ALKSILDVQDDLNQQR 253