Pairwise Alignments

Query, 383 a.a., transcriptional activator from Sinorhizobium meliloti 1021

Subject, 313 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  139 bits (350), Expect = 1e-37
 Identities = 79/240 (32%), Positives = 130/240 (54%), Gaps = 3/240 (1%)

Query: 1   MGDLSDIRVFLAVAQQRSFTAAARQLSMTPPTVTRSVSALEQSLGVQLLLRTTRQVSLTS 60
           M  L+D+ +F+  A+Q SF+ AA  LS+T   V+ ++  LE+ +   L +R+TR + LT 
Sbjct: 1   MKALNDLNLFVETARQGSFSKAANSLSLTTAAVSAAIRRLEEQVQFPLFVRSTRHIRLTH 60

Query: 61  AGAVYAARVEPLIRQFDQVRDDLREEQGDVAGLIRINAPLSLGQQLLPDIVSGFRAEHPQ 120
            G ++ A+ +  +    +  D +   +G +AG + I+AP  LG+ LL D +  F A HP 
Sbjct: 61  EGEIFLAKTQTALATLQEGLDQIACARGQLAGQLHISAPSDLGRNLLLDWIDEFIALHPN 120

Query: 121 VSVSLSLTDRFIDIVSERFDLALRVSEAPRDRSTIWRKVC-RVRRILVASPGYLAIFGTP 179
           V+V L L+DR  D+ +   D+A+R  + P D + +   +C    R+L ASP YLA     
Sbjct: 121 VTVKLDLSDRLTDMYANPVDIAIRYGQ-PADSNLVAMLLCDSNERVLCASPEYLAAHPPI 179

Query: 180 ETPDDLSRHGCIAYD-EEAISETWELTNGGRTRKALAGKVLAANNGELIAKLVEDGQGLA 238
             PDDL  H C+ +   + +   W L+  G T   +     A N+GE++ +L   G+G+A
Sbjct: 180 LHPDDLQHHNCLCFMLADTLHNKWILSRNGETHSVVVQGNPACNDGEVVHRLAVKGKGIA 239