Pairwise Alignments

Query, 147 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 162 a.a., Na(+)-translocating NADH-quinone reductase subunit E from Klebsiella michiganensis M5al

 Score = 81.6 bits (200), Expect = 5e-21
 Identities = 40/131 (30%), Positives = 74/131 (56%), Gaps = 6/131 (4%)

Query: 4   RTFPDRIRHALLFEAIGLMIITPVAAYLFNKPIMHMGVVGIGSATIATIWNFVFNLGFDH 63
           +T  +R+ HA+ FE +  +I+ P AA+L  + ++ MG + I  AT+A +WN ++N  FD 
Sbjct: 9   KTLTERVIHAISFEGLATLILAPTAAWLMQRSVVEMGGLSILLATLAMVWNIIYNALFD- 67

Query: 64  GMRRMFGDTN--KTFKMRLVHTVLFEIGLLAILLPPIAWYLNMGLFETLQLDLAIVAFYL 121
              R++  +   +  ++R +H + FE G + I +  +A  L + L +   L++  + F+L
Sbjct: 68  ---RLWPVSRVVRNLRVRALHAIGFESGFILIGVTMVALVLGVSLMQAFMLEIGFMLFFL 124

Query: 122 VYNFVFNVAYD 132
            Y   FN A+D
Sbjct: 125 PYTMAFNWAWD 135



 Score = 45.8 bits (107), Expect = 3e-10
 Identities = 20/64 (31%), Positives = 34/64 (53%)

Query: 74  KTFKMRLVHTVLFEIGLLAILLPPIAWYLNMGLFETLQLDLAIVAFYLVYNFVFNVAYDR 133
           KT   R++H + FE     IL P  AW +   + E   L + +    +V+N ++N  +DR
Sbjct: 9   KTLTERVIHAISFEGLATLILAPTAAWLMQRSVVEMGGLSILLATLAMVWNIIYNALFDR 68

Query: 134 VFPV 137
           ++PV
Sbjct: 69  LWPV 72



 Score = 21.9 bits (45), Expect = 0.005
 Identities = 14/60 (23%), Positives = 26/60 (43%)

Query: 3   MRTFPDRIRHALLFEAIGLMIITPVAAYLFNKPIMHMGVVGIGSATIATIWNFVFNLGFD 62
           +R    R  HA+ FE+  ++I   + A +    +M   ++ IG       +   FN  +D
Sbjct: 76  VRNLRVRALHAIGFESGFILIGVTMVALVLGVSLMQAFMLEIGFMLFFLPYTMAFNWAWD 135