Pairwise Alignments

Query, 392 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 306 a.a., ABC-type spermidine/putrescine transport system, permease component II from Caulobacter crescentus NA1000

 Score =  147 bits (371), Expect = 4e-40
 Identities = 82/231 (35%), Positives = 128/231 (55%), Gaps = 15/231 (6%)

Query: 174 ILVRTFWIAALVTFACAGIGFPYAMIAASLTGWKRDLMLAAVLLPLWTSLLVRTAAWFIL 233
           I +++ W+A L T  C  IGFP A+     +   +  +L  ++LP WT+LL+RT A   +
Sbjct: 72  IFLKSVWVAGLTTGLCLVIGFPVALAITFASDKAKAWLLLLIMLPFWTNLLIRTYALIAV 131

Query: 234 LQEKGLINDLLQTL-----GLINA----------PLPLIFNRTGVVIAMTHVLLPFMVLP 278
           L+ +G +N  L+       GL             PL L+ N   V++ + +V LPFMVLP
Sbjct: 132 LRTEGYVNQGLEWFWKGGSGLATLIGLQPLGDFQPLELLHNNFAVILGLVYVHLPFMVLP 191

Query: 279 IYSVLITIPKNLMPAAASLGAPPWRAFLRVLLPLSLRGLASGSLLVFISAIGYYITPALI 338
           +YS L  + K+L+ A+  LGA   R   +V++PL++ G+ASG L+ FI A+G Y+TP L+
Sbjct: 192 LYSALDRLDKSLLEASLDLGAGHLRTLFKVVVPLAIPGIASGVLITFIPALGAYLTPDLL 251

Query: 339 GGPGDQMISSIIAFYAMGSANWGMAGALGVVLLVATLLLYGVYARLSTGEP 389
           GGP  QMI++II      + +W    AL  +L+  T +   + A L+   P
Sbjct: 252 GGPDSQMIANIIERQFKRANDWPFGAALSFLLMYLTFIAIAIQAVLNRKAP 302