Pairwise Alignments

Query, 392 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 425 a.a., polyamine ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  318 bits (814), Expect = 2e-91
 Identities = 168/395 (42%), Positives = 250/395 (63%), Gaps = 11/395 (2%)

Query: 2   SAVSSRAGRSVALLAPLLLFLIGFFVWPLLSMMSQAVSDQAVLSLLPRSAVVLTDWDRKS 61
           +A + +   ++ L+APL +FL+  FV P+ +++++A  +  V++ LP +   L+ WDRK+
Sbjct: 24  AAEARKRAMALLLIAPLAIFLLLIFVVPIGALLTRAAQNPEVVNALPHTVASLSAWDRKT 83

Query: 62  PPTVPMQMALMEDLKAVDDDQALGDMVRRLNSARSGFRTLMSKTTRAL---DDTANP--- 115
           PP      AL  DL A+ D   +G + RRLN    G+R+L++K+ RA+   DD + P   
Sbjct: 84  PPPDTAYTALAVDLAAIADSDGMGALARRLNVEIPGYRSLVAKSARAMPFVDDNSKPLQL 143

Query: 116 -----PANLVSIDKRWEKPEFWLAIADALSPLTDRNLLAAVDLGRNSTGDIEHLPADQSV 170
                 A    +D+RW    +W AIA      +   LLA++D  +++ G I     DQ +
Sbjct: 144 TPAQMHAKFAELDERWNDIAYWQAIAKNAGAYSPFYLLASLDHKQDAFGHIIPTDPDQQI 203

Query: 171 NRVILVRTFWIAALVTFACAGIGFPYAMIAASLTGWKRDLMLAAVLLPLWTSLLVRTAAW 230
              +  RTF I A VTF    +G+P A   ++L+  + +L++  VL+P WTS+LVR AAW
Sbjct: 204 YLAVFSRTFVIGAAVTFFALLLGYPLAYWISTLSERRANLVMILVLIPFWTSILVRVAAW 263

Query: 231 FILLQEKGLINDLLQTLGLINAPLPLIFNRTGVVIAMTHVLLPFMVLPIYSVLITIPKNL 290
            ++LQ +GL+N  L   GL++ PL L+FNRTGV I+MTH+LLPFM+LP+YSV+ +IP   
Sbjct: 264 IVILQSEGLVNKALIGSGLLHDPLALLFNRTGVYISMTHILLPFMILPLYSVMKSIPPTY 323

Query: 291 MPAAASLGAPPWRAFLRVLLPLSLRGLASGSLLVFISAIGYYITPALIGGPGDQMISSII 350
             AA SLG+ P+ AF RV +P +  G+ +G+LLVFI AIGYYITPAL+GGP DQM+S  +
Sbjct: 324 QRAAISLGSHPFAAFWRVYVPQTYPGIGAGALLVFILAIGYYITPALLGGPNDQMVSYYV 383

Query: 351 AFYAMGSANWGMAGALGVVLLVATLLLYGVYARLS 385
           A++   + NWGMA ALG +LL ATL+LY +Y R +
Sbjct: 384 AYFTNVTINWGMACALGGLLLAATLVLYVIYGRFT 418