Pairwise Alignments

Query, 388 a.a., HlyD-family protein from Sinorhizobium meliloti 1021

Subject, 413 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

 Score =  170 bits (430), Expect = 8e-47
 Identities = 111/340 (32%), Positives = 184/340 (54%), Gaps = 13/340 (3%)

Query: 31  GPV-VGVMTVQVENVSPAHEFVGRVEALNAVDIRARVEGFLERRLFAEGQNVEKGQDLFT 89
           GPV V V  V+       ++ +G V  LN V++R+RV G L    F EGQ V+KG  L  
Sbjct: 54  GPVPVRVAKVEQGEFEVFNKALGSVTPLNTVNLRSRVGGELVELRFEEGQRVKKGDLLAV 113

Query: 90  LERTTYELALEDAQATLVGAQTNFDNAERQLQRNRAL-SQRTVSQAVIEESHAARDIARA 148
           ++   Y++AL+ A+ TL   +    NA+   +R R L +  ++++  ++   A     + 
Sbjct: 114 IDPRPYKVALQQAEGTLQQNRAQLKNAQVDFERYRGLFADDSIAKQTLDTQEALVSQYQG 173

Query: 149 SVLSAQTRVNQAELNLGYTHIKAPIDGRIGRAAYSVGSLVSPS-SEPLARVVQTDPIRVV 207
           ++ + Q  VN+A LNL +T I++PIDGR+G     VG+LV+ + + PL  + QT P+ + 
Sbjct: 174 TLAANQASVNEARLNLEFTQIRSPIDGRVGLRQLDVGNLVAANDTTPLVVITQTQPMSIS 233

Query: 208 FSVSDRTILDLRTIAGGAGKDELAKGYALKLRL-SNGEPYQ-QSGKLEFFGNEIDVQTGT 265
           F++ +  +L + T           +G  L +++   GE      G LE   N+ID  TGT
Sbjct: 234 FTLPEGDLLPVLT--------RYRQGDKLAVQIWDRGEKLMFGEGLLESIDNQIDATTGT 285

Query: 266 LPIRALFANAQSLLMPGQFVTVIVEPEEREERPVVPVGSVEQDREGRFVLVVDGESRAAV 325
           L ++A F N Q LL+P QFV V +  E   +  ++P  +++    G F  VV  +++  +
Sbjct: 286 LRLKARFDNEQELLIPNQFVNVRLRVETLSDAVLIPSAALQFGSRGTFAYVVGEDNKVQL 345

Query: 326 RRIRASVQVGQNWVVEEGLQGGEKLIVEGLQRVSPGAVVE 365
           R ++A    G+  VV EGL+ GE++++EG  R+  GA VE
Sbjct: 346 RLLKAGPSNGETTVVLEGLEVGERVVMEGTDRLRDGAEVE 385