Pairwise Alignments

Query, 388 a.a., HlyD-family protein from Sinorhizobium meliloti 1021

Subject, 397 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodopseudomonas palustris CGA009

 Score =  177 bits (450), Expect = 4e-49
 Identities = 121/377 (32%), Positives = 199/377 (52%), Gaps = 11/377 (2%)

Query: 13  LGVSGLLLCSAGDGVAQTG----PVVGVMTVQVENVSPAHEFVGRVEALNAVDIRARVEG 68
           L +  L+ CS   G         P VGV+TV+ ++++   E  GR+  +   ++R RV G
Sbjct: 17  LALISLVSCSEQSGPPNEATAAVPEVGVVTVEAKSITLTKELPGRITPMRIAEVRPRVSG 76

Query: 69  FLERRLFAEGQNVEKGQDLFTLERTTYELALEDAQATLVGAQTNFDNAERQLQR-NRALS 127
            +  R F +G  VE G  L+ ++ + +++ L+  +A L  A+     A RQ  R    L+
Sbjct: 77  IVIERTFQQGSLVEAGAPLYRIDPSPFQVELDKTRAALAKAEAVLYQASRQEDRLKNLLT 136

Query: 128 QRTVSQAVIEESHAARDIARASVLSAQTRVNQAELNLGYTHIKAPIDGRIGRAAYSVGSL 187
            +  +QA  E + AA   A A V + +  V+QA+LNL    ++API GRIGRA  + G+L
Sbjct: 137 GQATTQAQYELAVAAERQAEAEVAAQKAAVDQAQLNLNLATVRAPISGRIGRALVTEGAL 196

Query: 188 VSPS-SEPLARVVQTDPIRVVFSVSDRTILDL-RTIAGGAGKDELAKGYALKLRLSNGEP 245
           V+ + +  LA + Q DPI   F+ S   + +L R +A G  K    +   ++L L +G  
Sbjct: 197 VNTNETSQLATIQQLDPIYADFTQSVGELYELKRDLAEGRLKSVSPEAARVRLVLDDGST 256

Query: 246 YQQSGKLEFFGNEIDVQTGTLPIRALFANAQSLLMPGQFVTVIVEPEEREERPVVPVGSV 305
           Y+  G+L F    +D  T  + +R  F N  + L+PG +V V +E     +  VVP  +V
Sbjct: 257 YRHVGRLLFSDISVDPGTARVTLRGEFPNPDADLLPGMYVRVQIEEAIDTDGIVVPAQAV 316

Query: 306 EQDREG-RFVLVVDGESRAAVRRIRASVQVGQNWVVEEGLQGGEKLIVEGLQRVSPGAVV 364
           ++   G   + VV+ E RA ++ +RA   +    ++EEGL+ G +++V+G Q+ SPGA V
Sbjct: 317 QRTAAGSAAIYVVNDEGRAMLQPVRAGRMLAGGALIEEGLKPGWRIVVDGFQKFSPGAAV 376

Query: 365 EA---QSVSAGDAATDT 378
           +    QS +A  A+  T
Sbjct: 377 KPVPWQSAAAEPASKPT 393