Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 536 a.a., Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  239 bits (609), Expect = 1e-67
 Identities = 124/262 (47%), Positives = 178/262 (67%)

Query: 1   MQNEPLLSVSNLTVDLLTAKSAVRPVDEVSYSVRQGECLAIVGESGSGKTVMNFAPLGLM 60
           M  + L+ V +L V+ +  +   R V+ VS+ +++GE LA+VGESGSGK+V   + L L+
Sbjct: 1   MNQDNLIEVRDLAVEFIVGERRQRVVEGVSFDIKRGETLALVGESGSGKSVTAHSILRLL 60

Query: 61  PSGVATQLSGSVRFQGQELIGLPEREIRKYRGKSIGFIFQDPMSALNPVRRIGRQIAEMA 120
           P  +A   +G++++ GQ L+GL E+ IR  RG  I  IFQ+PM++LNP+  I +QI E+ 
Sbjct: 61  PYPLAHHPTGTIQYAGQNLLGLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVL 120

Query: 121 ELHLNMSPRAAEERALDLVKLVGISDPAARLSQFPHELSGGLRQRIVIAIALAGEPKLLI 180
            +H  +S + A  R L+L++LVGI +P  RL   PHELSGG RQR++IA+ALA EP+LLI
Sbjct: 121 GIHKGLSGKVATRRTLELLELVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLI 180

Query: 181 ADEPTTALDVTVQAQILRLLKDLQHRLNMAMVLITHDMGVVAGAADNVLVMYAARGAERG 240
           ADEPTTALDVTVQ +IL LLK LQ RL M+++LI+HD+ +V   A  V VM      E+ 
Sbjct: 181 ADEPTTALDVTVQLKILELLKQLQARLGMSLLLISHDLNLVRRIAHRVCVMQRGCIVEQA 240

Query: 241 PVDKVLVNPRHPYTKGLINAIP 262
             +++   P+HPYT+ L+ A P
Sbjct: 241 SCEELFRAPQHPYTRELLGAEP 262



 Score =  164 bits (415), Expect = 5e-45
 Identities = 96/263 (36%), Positives = 153/263 (58%), Gaps = 16/263 (6%)

Query: 5   PLLSVSNLTVDLLTAKSA-------VRPVDEVSYSVRQGECLAIVGESGSGKTVMNFAPL 57
           PLL V +L V     K         ++ VD + +S+ QG+ L IVGESGSGK+ +  A L
Sbjct: 274 PLLQVEDLKVWFPIKKGLFKRTVDYIKAVDGIRFSLPQGQTLGIVGESGSGKSTLGLAIL 333

Query: 58  GLMPSGVATQLSGSVRFQGQELIGLPEREIRKYRGKSIGFIFQDPMSALNPVRRIGRQIA 117
            L+ S       G +RF+G++L  L ++++R  R + +  +FQDP  +L+P   + + + 
Sbjct: 334 RLIGS------QGGIRFEGKQLDSLTQQQVRPLR-REMQVVFQDPFGSLSPRMCVSQIVG 386

Query: 118 EMAELHLNMSPRAAEERALDLVKLVGISDPAARLSQFPHELSGGLRQRIVIAIALAGEPK 177
           E   +H   +    E+  +  +K VG+ DP  R +++PHE SGG RQRI IA AL  +P 
Sbjct: 387 EGLRIHKIGTEAEQEQAIIAALKEVGL-DPETR-NRYPHEFSGGQRQRIAIARALVLKPA 444

Query: 178 LLIADEPTTALDVTVQAQILRLLKDLQHRLNMAMVLITHDMGVVAGAADNVLVMYAARGA 237
           L++ DEPT+ALD TVQ Q++ LL+ LQ + N+  + I+HD+ VV   +  ++V+   +  
Sbjct: 445 LILLDEPTSALDRTVQRQVVELLRSLQTKYNLTYLFISHDLAVVKALSHQLMVVKHGQVV 504

Query: 238 ERGPVDKVLVNPRHPYTKGLINA 260
           E+G    +   P+HPYT+ L+ A
Sbjct: 505 EQGDARSIFAAPQHPYTQQLLEA 527