Pairwise Alignments

Query, 304 a.a., integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 337 a.a., tyrosine recombinase XerD from Phaeobacter inhibens DSM 17395

 Score = 65.5 bits (158), Expect = 2e-15
 Identities = 72/243 (29%), Positives = 106/243 (43%), Gaps = 25/243 (10%)

Query: 60  RRNRLLTVRRFALSLHAEDPRHEVPSADLFGRASRKRRTPYIYSPEEIRRLIDAARRLGP 119
           R  RL  +++       E  R + P+  + G   R++  P      E+ RL+DAAR+ G 
Sbjct: 83  RARRLSAIKQIYRFAFDEGWRSDNPAIQIKG-PGRQKALPKTLEVIEVDRLLDAARQSGR 141

Query: 120 DDSIRSLTYATMFGLIAATGMRVSEAIAIRLHDVT-DDGLIIAQTKFKKSRLLPLHTTTR 178
           + S R L    M  L+ ATGMRVSE + + +     D  +++   K  K R++PL    R
Sbjct: 142 NLSDR-LRNTCMMELLYATGMRVSELVGLPVAAARGDPRMLLVLGKGGKERMVPLSPPAR 200

Query: 179 RALDGYLATR--------LKAASQSDALFISHQGTPLAYPTVITVFLQIIRSIGLRGAPG 230
            AL  +L TR         K A+ S  LF S   +   + T    +L +I+   + G   
Sbjct: 201 DALAAWLTTRDAAEEAAVAKGAAPSRFLFPSRGKS--GHLTRHRFYL-LIKEFAVAGGLP 257

Query: 231 SRGPRIHDLRHTFAVRSLEHCAHDSQAVARHITALSTYLGHAHVTDTYWYLQSTPELMAH 290
                 H LRH FA   L + A         + A+   LGHA +  T  Y   T  L A 
Sbjct: 258 PEAVSPHTLRHAFATHLLTNGA--------DLRAIQALLGHADIATTEIY---THVLDAR 306

Query: 291 MSE 293
           +SE
Sbjct: 307 LSE 309