Pairwise Alignments

Query, 304 a.a., integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 299 a.a., site-specific tyrosine recombinase XerD from Pedobacter sp. GW460-11-11-14-LB5

 Score = 44.3 bits (103), Expect = 4e-09
 Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%)

Query: 101 IYSPEEIRRLIDAARRLGPDDSIRSLTYATMFGLIAATGMRVSEAIAIRLHDVTDD-GLI 159
           IY   E+   IDA++  G       +    +  ++   G+RV+E   +R+ +V      I
Sbjct: 116 IYEINELIAGIDASKSEG-------MRNKAIMEVLYGCGLRVTELTELRISNVFPQIEFI 168

Query: 160 IAQTKFKKSRLLPLHTTTRRALDGYL-ATRLKA---ASQSDALFISHQGTPLAYPTVITV 215
               K  K RL+P+ +   + LD Y+   R+ A       D +F++  G  L+  ++  +
Sbjct: 169 KVIGKGNKERLVPIGSVALKLLDIYINEVRVHANIKKGHEDFIFLNRFGAKLSRISIFNL 228

Query: 216 FLQIIRSIGLRGAPGSRGPRIHDLRHTFAVRSLEHCAHDSQAVARHITALSTYLGHAHVT 275
              +  S GL+          H LRH+FA   +E  A         + A+   LGH+ +T
Sbjct: 229 IKSLAISTGLKKTISP-----HTLRHSFATHLIEGGA--------DLRAVQEMLGHSSIT 275

Query: 276 DTYWY 280
            T  Y
Sbjct: 276 TTEIY 280