Pairwise Alignments

Query, 409 a.a., integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 324 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis S2

 Score = 50.4 bits (119), Expect = 7e-11
 Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 5/157 (3%)

Query: 238 TRGRLRDRAILLLLARLGLRAGDVAGLRLSDIEWTSGMLRLSG-KARRQVRLPLPQDVGD 296
           +R RLRD  I+ +L   G R  +   +R  D ++  G  R+   K   +  + + ++  +
Sbjct: 151 SRTRLRDALIVRVLWETGCRRSEALSIRYKDCDFEKGRFRIRDTKTYEERTVVIAEETVE 210

Query: 297 ALLAYIEQERPRMHQEAVFLTMIAPYRSFAQSSHVSTIVALALKRAGISDPPSTGACL-- 354
            +  YI++   R   + +F   +       +   ++ +   A+++         G  +  
Sbjct: 211 IVRDYIKENIKRDSNDYIFQNEMIQNGKRVKLDWITNVFKKAVRKLKEEGVIPEGKRIVI 270

Query: 355 --LRHSAATSMLRSGATLEAVGTVLRHRSLDMTAHYA 389
             LRH  AT +L  G  ++ V  +L HRSL+ T +Y+
Sbjct: 271 HSLRHGRATDLLDKGVPIDVVKEILGHRSLETTLYYS 307