Pairwise Alignments

Query, 421 a.a., transposase from Sinorhizobium meliloti 1021

Subject, 522 a.a., Mobile element protein from Pseudomonas fluorescens FW300-N2E2

 Score =  157 bits (398), Expect = 5e-43
 Identities = 113/336 (33%), Positives = 159/336 (47%), Gaps = 26/336 (7%)

Query: 34  MSATLQAHDQLIGELRLRIAKLKKQVFGKSSEKIEREIQQLELALEDLLIAAAENSTKPL 93
           M   +     +I +L   IA+LK+  F K SE++  E   L   L D  IAA E   + L
Sbjct: 43  MGKKINRDQTVIEKLTHEIAQLKRLKFAKRSEQMNPEQAGLLDDLVDTDIAAIEAELQAL 102

Query: 94  DEVDAAVPAAPVASRPEKTMRRRPRVSEKAARERKELDP-GTCCPDCGGELRLVGEDVSE 152
             V        +A   +K   +R  +S +  R     +P  T CP C   L+ +GEDVSE
Sbjct: 103 QTV--------LAPTEKKQKPKRTALSAEFPRTLIHHEPDNTHCP-CACALKRIGEDVSE 153

Query: 153 ILDMIAAQMKVIEVARLKKSCRCCEKMVQLPAPSRPIPGSMAGAGLLAYILVSKFDDHLP 212
            LD       V    R K  C  CE ++Q P P++ I   +  AGLLA+++++KF DHLP
Sbjct: 154 KLDYTPGVFTVERHIRGKWVCDDCETLIQAPVPAQVIDKGIPTAGLLAHVMIAKFADHLP 213

Query: 213 LYRLNEIFARMGADIPDSTLVDWCGRAMQVLQPLIERIEAVVMSSDLLHADDTPIRVLDR 272
           LYR   IF R G  IP STL  W G     LQPL++ +  VV+   ++HAD+TP+++L  
Sbjct: 214 LYRQESIFGRAGLAIPRSTLAQWVGVTGVQLQPLVDALRDVVLGQQVIHADETPVQMLVP 273

Query: 273 SLRDKGLGKGVKKGRIWTYVRDQRPWAGAAPPGAVYYFAPDWKEEHVHHHLRQTSGILQA 332
                   K  ++  +W Y   Q     A     VY F+P    EH  + L+     L  
Sbjct: 274 G------SKKTQRSYVWAYTTSQFSNLAA----VVYDFSPSRAGEHARNFLQDWKCKLVC 323

Query: 333 DGYKGYGKLYEPGADGIGRFREAACWAHWRRDFHDI 368
           D + GY   +E G   IG      C AH RR F ++
Sbjct: 324 DDFGGYKASFELGVTEIG------CMAHARRKFFEL 353