Pairwise Alignments

Query, 325 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 320 a.a., chaperon-like protein for quinone binding in photosystem II from Synechococcus elongatus PCC 7942

 Score =  102 bits (254), Expect = 1e-26
 Identities = 88/264 (33%), Positives = 127/264 (48%), Gaps = 18/264 (6%)

Query: 33  VLVVGATGFLGTKILRNLAHDASVAVVAMSRKGAPSNESADVEW----VRGDMMDPGSLD 88
           VLVVGATG LG +I R  A D    V  + R  +P   +   EW    VRGD+  P SL 
Sbjct: 3   VLVVGATGTLGRQIARR-ALDEGHRVRCLVR--SPKRGNFLREWGCDLVRGDLTQPESLT 59

Query: 89  RALQGVDVVVTSANSYMKGSL---DTDFQGNRNLIEAAARANVGRFVFLSIVSCEAASPV 145
            AL+G++ V+ +A +    SL   D D+QG  NLI+AA  A V RFVF SI+  E    V
Sbjct: 60  FALEGIEAVIDAATTRSTDSLSCYDVDWQGKVNLIKAATEAGVQRFVFCSIIDAEKHRDV 119

Query: 146 PHFHAKKVAEDLIQASGVPYVFVRAPTFLDQSTDFIAKGAQAGRFLAMGDKTTRWSYVLT 205
           P    K   E+ ++ SG+ Y  +R   F+       A     GR   +   +   +Y+ T
Sbjct: 120 PLMDIKYCTEEFLRQSGLNYTILRLAGFMQGLIAEFAIPVLEGRTAFITQDSDPIAYLST 179

Query: 206 DDLASYLAKAATFPGSEINNQTIDVGWRDGPK--SQQEIADLVSEIAKKSLKVRVVPWLV 263
            D+A +   A T P +E   QT+ V    GPK  S  EI  L   ++ K  K+  +P   
Sbjct: 180 LDIARFAVAALTTPATE--KQTLPV---VGPKAWSGLEIFRLCERLSGKETKIARLPLAT 234

Query: 264 LRLLVHPVKPFSELGYDLIQMLLF 287
           +  +    + F + G+++   L F
Sbjct: 235 VSAMKRFFR-FFQWGWNIADRLAF 257