Pairwise Alignments

Query, 497 a.a., CpaF2 pilus assembly protein from Sinorhizobium meliloti 1021

Subject, 397 a.a., twitching motility protein from Synechococcus elongatus PCC 7942

 Score = 58.2 bits (139), Expect = 5e-13
 Identities = 72/245 (29%), Positives = 109/245 (44%), Gaps = 30/245 (12%)

Query: 214 RVNVIAPPLAIDGPTLTIRKFKKEKLTLDQLVRFGSISPEGAEVLKIIGRVRCNVLISGG 273
           R+N+     ++ GP++ +R      L+LD+L    S+ P   ++      +   VL++G 
Sbjct: 127 RINIFG---SLRGPSMVMRLIPLRILSLDEL----SLPPVFRDICYYPKGL---VLVTGP 176

Query: 274 TGSGKTTLLNCLTGYIDH--GERVITCEDAAELQLQQPHVVRLETRPPNIEGQGEITMRN 331
           TGSGK+T L  +  +I+    + +IT ED  E   Q    +  +        Q E  +R 
Sbjct: 177 TGSGKSTTLAAMIDFINQEMAKNIITIEDPIEFVHQSQRSLIKQREVGVHTRQFEAALRA 236

Query: 332 LVKNCLRMRPERIIVGEVRGPEAFD-LLQAMNTGHDGSMGTLHANSPREAMARIEAMITM 390
                LR  P+ I+VGE+R  E  +  L+A  TGH   M TLH NS  + + R+  M   
Sbjct: 237 ----SLREDPDIILVGELRDRETINTALKAAQTGH-LVMATLHTNSAVKTIERVLNMFEP 291

Query: 391 GGSSLPAKTIREMLVSSVDVIVQA-ARLRDGSRRITHITEVLGMEGEVVTTQDLFVYDIL 449
                    + E LVS   VI Q   R   G R   H  E+L      + T  +  Y I 
Sbjct: 292 AEQPPVRVALAESLVS---VIAQGLCRTIHGKRTAYH--EIL------INTDAIKDYIIR 340

Query: 450 GEDEK 454
           GE E+
Sbjct: 341 GELEE 345