Pairwise Alignments

Query, 497 a.a., CpaF2 pilus assembly protein from Sinorhizobium meliloti 1021

Subject, 350 a.a., Flp pilus assembly protein, ATPase CpaF from Dechlorosoma suillum PS

 Score =  125 bits (315), Expect = 2e-33
 Identities = 95/325 (29%), Positives = 157/325 (48%), Gaps = 42/325 (12%)

Query: 142 LEPLLARDDIADIMVNGANQVFIEVNGRVQETGIRFRDNEQLLNICQRIVSQVGRRVDES 201
           + P L  D + ++M+N    +++E  G ++   +   D +  ++   RI++ + ++ D  
Sbjct: 20  IRPHLEDDTVQEVMINSPKDIWVESLGVMKPIDVALEDEQ--VDAVIRILAGLNKKAD-- 75

Query: 202 SPICDARLGDGSRVNVIAPPLAIDGPTLTIRKFKKEKLTLDQLVRFGSISPEG------- 254
           + I + RL    RV     P+A+ G ++ IRK    KL ++  V+ G+  P         
Sbjct: 76  AQILEFRLPK-LRVAAARHPIAMRGHSMCIRKHSARKLAIEDYVKAGAFDPISFDQVPGG 134

Query: 255 ------------------AEVLKIIGRVRCNVLISGGTGSGKTTLLNCLTGYIDHGERVI 296
                             A+ LK + + R   LI G T SGKTTL+  L   +   +RVI
Sbjct: 135 SQIPEEIAANLHNGGQVLADFLKWMVQSRKTPLIGGATSSGKTTLIGALLDLVQPEDRVI 194

Query: 297 TCEDA---AELQLQQPHVVRLETRPPNIEGQGEITMRNLVKNCLRMRPERIIVGEVRGPE 353
             ED    +EL+   P+ V  E+     E  G +++R+LV+  LR RP RII+GE+RG E
Sbjct: 195 IIEDTGELSELEFDLPNRVHFESN----ESLG-VSIRDLVRLALRYRPTRIIIGEIRGAE 249

Query: 354 AFDLLQAMNTGHDGSMGTLHANSPREAMARIEAMITMG--GSSLPAKTIREMLVSSVDVI 411
            +D+L A  TGH G   +LHA++  +A+  +E  I M      LP  ++R  +  +   +
Sbjct: 250 GYDMLNAYGTGHPGGACSLHADNAPQALISLENKIRMSHEARELPLASLRSQIAQTFPYV 309

Query: 412 VQAARLRD--GSRRITHITEVLGME 434
           V AA +      R  T I EV G++
Sbjct: 310 VHAANVIGVYPPRAPTEIVEVRGVD 334