Pairwise Alignments

Query, 497 a.a., CpaF2 pilus assembly protein from Sinorhizobium meliloti 1021

Subject, 634 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

 Score =  389 bits (999), Expect = e-112
 Identities = 206/443 (46%), Positives = 290/443 (65%), Gaps = 14/443 (3%)

Query: 29  SEERTAEAAVQPVVENELQAAHAPV-----QVRKPPQVPATAKPENAEQYYSLKKEIFSA 83
           S +R+     +  V     AA AP+     QV+K         P N+     L+K+    
Sbjct: 164 SIDRSVAMVRESAVAPSKPAAEAPLRMHSAQVKKTAAESLPVAPINSPVGIELRKQAHMK 223

Query: 84  LIATIDVAALS--NMDGEQARNEIGAIINDIV----AAKKAGISMAEQNDLLSDICNDIL 137
           +IA +D+  L+   M+ +  R  + A ++DI+    + +   I++     L   + ++I+
Sbjct: 224 VIAALDLRRLNVARMEEDDLRKTVSAALDDILNHDASFRSPDIAL---ETLKKSVFDEII 280

Query: 138 GYGPLEPLLARDDIADIMVNGANQVFIEVNGRVQETGIRFRDNEQLLNICQRIVSQVGRR 197
           G GPLE LLA   +++IMVN  +++F+E  G+++ T + F D+  ++   +RIV+ +GRR
Sbjct: 281 GLGPLEELLADPTVSEIMVNCHDEIFVEQAGQLKRTPVIFTDDRAVIGAIERIVAPIGRR 340

Query: 198 VDESSPICDARLGDGSRVNVIAPPLAIDGPTLTIRKFKKEKLTLDQLVRFGSISPEGAEV 257
           +DESSP+ DARL DGSRVN + PPLA+ GP++TIRKF K KL    L+ FG++SPE  E 
Sbjct: 341 IDESSPMVDARLADGSRVNAVIPPLALKGPSITIRKFSKRKLVGQDLLNFGTMSPEMLEF 400

Query: 258 LKIIGRVRCNVLISGGTGSGKTTLLNCLTGYIDHGERVITCEDAAELQLQQPHVVRLETR 317
           L        N++ISGGTGSGKTTLLN L+ YI   ER++T EDAAELQL QP++V LE R
Sbjct: 401 LHTAVEQGANIIISGGTGSGKTTLLNVLSSYIPDSERIVTVEDAAELQLSQPNLVSLEAR 460

Query: 318 PPNIEGQGEITMRNLVKNCLRMRPERIIVGEVRGPEAFDLLQAMNTGHDGSMGTLHANSP 377
           P N+EG+G I +R+LVKNCLRMRP+RI++GE RG EA D+LQAMNTGHDGS+ T HAN+P
Sbjct: 461 PANMEGKGAIHIRDLVKNCLRMRPDRIVIGECRGGEALDMLQAMNTGHDGSLTTAHANTP 520

Query: 378 REAMARIEAMITMGGSSLPAKTIREMLVSSVDVIVQAARLRDGSRRITHITEVLGMEGEV 437
           R+ +AR+E M  M G  LP + IRE + S+VD+IVQ +R   GSRR+TH+TEV GME  V
Sbjct: 521 RDCIARLEVMTLMAGLDLPVQAIREQICSAVDIIVQQSRFSCGSRRVTHVTEVSGMESGV 580

Query: 438 VTTQDLFVYDILGEDEKGNIIGR 460
           +T QD+FV+   G  E G I+G+
Sbjct: 581 ITLQDVFVFKEEGFGENGKIVGK 603