Pairwise Alignments

Query, 222 a.a., chemotaxis protein from Sinorhizobium meliloti 1021

Subject, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

 Score = 51.6 bits (122), Expect = 3e-11
 Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 4/151 (2%)

Query: 20  RMAAAIEQTEALLEA--AQQDSEAQYEQRSPRVAVD-VSAGQSEEQAVGLVIFVLADRQF 76
           R   ++   E L +A    Q SEA  ++ +    +D VS  + +   + LVIF L   +F
Sbjct: 322 RRTLSVISVEQLFDAQIVDQFSEAYPQEGTDMSTIDDVSILEDDNTDMQLVIFKLDKEEF 381

Query: 77  ALEIRYVCEIVS-RARVSPLPGMPPHACGVYDLRGQLLPVFDLRGPLDLPQEARIADDWA 135
            + I  V EI+     +S +P       GV +LRG +LP+ D+R    LP+ AR      
Sbjct: 382 GISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKRFHLPEMARHERQRI 441

Query: 136 IVCGQERPEFLILSEAAPEISTLPLEQIRAA 166
           +V   E+     + ++  E+  +P  Q+  A
Sbjct: 442 LVVNFEKISTGFIVDSVSEVLRIPESQLEDA 472



 Score = 45.4 bits (106), Expect = 2e-09
 Identities = 33/115 (28%), Positives = 52/115 (45%)

Query: 58  QSEEQAVGLVIFVLADRQFALEIRYVCEIVSRARVSPLPGMPPHACGVYDLRGQLLPVFD 117
           + EE     V F+L D  FAL ++ V EI+       +P  P +  G+ +LRGQ+LPV  
Sbjct: 12  EHEENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLC 71

Query: 118 LRGPLDLPQEARIADDWAIVCGQERPEFLILSEAAPEISTLPLEQIRAAEPAPGK 172
           LR  L + + +       IV    + +     +    ++T   E I+    A GK
Sbjct: 72  LRTLLCMDRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGK 126



 Score = 26.2 bits (56), Expect = 0.001
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 60  EEQAVGLVIFVLADRQFALEIRYVCEIVSRARV-SPLPGMPPHACGVYDLRGQLLPVFDL 118
           +E    LV  ++  +++A  +    EIV    + + +P       GV +LRG+ LP+  L
Sbjct: 187 DEDMRQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSL 246

Query: 119 RGPLDLP 125
           R    LP
Sbjct: 247 RTLFGLP 253