Pairwise Alignments
Query, 1071 a.a., Diguanylate cyclase/phosphodiesterase from Sinorhizobium meliloti 1021
Subject, 640 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS
Score = 395 bits (1015), Expect = e-114
Identities = 231/566 (40%), Positives = 334/566 (59%), Gaps = 27/566 (4%)
Query: 518 RAQRHAEAAADQLSSVLESTMDSVMLLDADWRVRYLNENARKLLQVGDEA-LGRVFWKLF 576
RA +EA + L V+ + +D + R+ + N + L EA LG +++
Sbjct: 82 RALAESEALYESLVQVMPQCL---YRMDRESRITFANRALERHLGKPREAILGHSPREVY 138
Query: 577 PEEEEGSFAKHCREVMDRRVRSFFEDHLS----SLGRWVEANASPTR------DGISIFC 626
P + + + V+ + E+ +S R++E +PT +GI
Sbjct: 139 PADLAAKYRQDDLRVLQGETLNLIEEMVSLDSEQRKRYIEIVKTPTYAPDGSINGIQGIF 198
Query: 627 RDITERRRAEEDTLLAQKQMAHMARHDMLTGLANRMFFRECFEEALNESNHA--RMAVLC 684
DIT R+ AEE Q+ ++A HD LT L NR+ R+ F +A ++ + R+A+L
Sbjct: 199 WDITARKSAEE-------QIEYLAHHDPLTDLPNRVLLRDRFLQAQGQAARSANRVAILF 251
Query: 685 LDLDGFKAVNDTLGHPAGDALLRQVSTRLIQAVRTTETVARLGGDEFAIIQPLTESRDEA 744
LDLD FK VNDTLGHP GD LL+ V+ RL + VR T+T++R GGDEF I+ P + A
Sbjct: 252 LDLDHFKLVNDTLGHPIGDRLLQAVAERLRRGVRETDTISRQGGDEFVIVLPELADPESA 311
Query: 745 FRLAQRLIDTLSEPFSIEGAAANVGTSIGIAFAPEDGTSADELIKAADIALYSAKSSGRG 804
+A +L++ + EP + G NV S+GIA P+DG D L+K AD A+YSAK +GR
Sbjct: 312 GSIAGKLMEQMHEPVRVNGHRLNVTFSLGIALYPDDGEDFDTLMKKADTAMYSAKEAGRN 371
Query: 805 TYKLFDVAMHAQLQAHQQMKITMRDALAKGEFELHYQPLVSLESRCVSCCEALLRWRHPE 864
T + F AM+ + A +++ ++ AL K E L+YQP L S + EALLRWR PE
Sbjct: 372 TLRFFTAAMNVEAAARLKLQNRLQRALEKEELVLYYQPQFDLASGRILGTEALLRWRDPE 431
Query: 865 RGMIAPSEFIPIAEETGLIVPIGEWILGEACRQAARWPER----VSVAVNLSPVQFKHRN 920
RG++ P EFIP+AE+TGLI PIGEW++GEACR+ RW E +++AVNLSPVQF+
Sbjct: 432 RGLVPPGEFIPVAEDTGLIGPIGEWVIGEACRELRRWHEAGATDLTMAVNLSPVQFRRSR 491
Query: 921 LVRAVAKALSATRLDPARLQLEITETVLLDESEHNLELLQDLRRLGVKIAMDDFGTGYSS 980
LV A+AL RL L+ E+TE++L+ E LE L L+ LGVK+++DDFGTGYSS
Sbjct: 492 LVEIAARALQENRLPAECLEFELTESLLIREDAAILETLTALKGLGVKLSIDDFGTGYSS 551
Query: 981 LGYLRSFPFDKIKVDQAFVRDLPHGKESLAIVKAVAGLGQSLGMTTSVEGVETEDQLAVV 1040
L YL+ F DK+K+DQ+F+R+L + AIV AV + + L + T EGVE +Q ++
Sbjct: 552 LAYLKRFNVDKLKIDQSFIRELCSNPDDEAIVSAVITMARQLRLRTVAEGVENAEQATML 611
Query: 1041 DSEGFNEVQGYLFSRPLPAAEISKLI 1066
+EVQG+LF RP+PAA+ L+
Sbjct: 612 RRFDCDEVQGFLFGRPMPAADFQALL 637
Score = 34.7 bits (78), Expect = 2e-05
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 6/145 (4%)
Query: 13 SHDLFQRLMDGIAEPVIIKDDASRFVFINDAACDLLGKDRNQLIGRTDHDILPGEQADRI 72
S L++ L+ + + + D SR F N A LGK R ++G + ++ P + A +
Sbjct: 87 SEALYESLVQVMPQCLYRMDRESRITFANRALERHLGKPREAILGHSPREVYPADLAAKY 146
Query: 73 VSLDRIVLSTSEGHELEEQITTPDGTQRTLLTK--KRCVSIPAGSTQEKFVVVTIVDITN 130
D VL E L E++ + D QR + K P GS + DIT
Sbjct: 147 RQDDLRVLQ-GETLNLIEEMVSLDSEQRKRYIEIVKTPTYAPDGSING--IQGIFWDITA 203
Query: 131 LRRTEETLRASEEHYRSLVDLHPQV 155
+ EE + H+ L DL +V
Sbjct: 204 RKSAEEQIEYL-AHHDPLTDLPNRV 227
Score = 33.9 bits (76), Expect = 4e-05
Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 15/132 (11%)
Query: 264 LRESEARFRAIADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAEALGFGWVDVIHPDDR 323
L ESEA + ++ P ++ D +F NR G+ LG +V D
Sbjct: 84 LAESEALYESLVQVMPQCLYRMDRESRITFANRALERHLGKPREAILGHSPREVYPADLA 143
Query: 324 QAVQETFFRATAGKE--------PVRSEYRLRRADGSWAWVIDVGQPRFSADGTFLGYVG 375
++ R G+ + SE R R ++ V P ++ DG+ G G
Sbjct: 144 AKYRQDDLRVLQGETLNLIEEMVSLDSEQRKR-------YIEIVKTPTYAPDGSINGIQG 196
Query: 376 SVLDITERRAAE 387
DIT R++AE
Sbjct: 197 IFWDITARKSAE 208
Score = 27.7 bits (60), Expect = 0.003
Identities = 34/145 (23%), Positives = 50/145 (34%), Gaps = 15/145 (10%)
Query: 128 ITNLRRTEETLRASEEHYRSLVDLHPQVPWTADT------AGEVLE--VGPRWSELTGLG 179
++ L+ + L SE Y SLV + PQ + D A LE +G + G
Sbjct: 74 LSRLQGSYRALAESEALYESLVQVMPQCLYRMDRESRITFANRALERHLGKPREAILGHS 133
Query: 180 EKETLGSGWAKAVHPQDAGALQEEWRRSLASGAPFDCEYRLLTKTGDYRWFRARAAAKRD 239
+E + A D LQ E + D E R R+
Sbjct: 134 PREVYPADLAAKYRQDDLRVLQGETLNLIEEMVSLDSEQR-------KRYIEIVKTPTYA 186
Query: 240 ADGKIVRWYGVLEDIDERRRAADDL 264
DG I G+ DI R+ A + +
Sbjct: 187 PDGSINGIQGIFWDITARKSAEEQI 211