Pairwise Alignments

Query, 1071 a.a., Diguanylate cyclase/phosphodiesterase from Sinorhizobium meliloti 1021

Subject, 833 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  355 bits (912), Expect = e-102
 Identities = 236/709 (33%), Positives = 369/709 (52%), Gaps = 52/709 (7%)

Query: 384  RAAEIAQQEAQAFIRS-IFDSSPDCVRVLDMEGRPLLMNEAGRRIFGLNEGAPVTGQT-- 440
            R  ++A+ EA+   +S I D   D V  +D+ G  +  N+   R+FG      V      
Sbjct: 146  RQEDLARMEAKVEEQSQILDHIHDSVITMDLSGYIMGWNKGAERLFGYTAAEAVGRHILF 205

Query: 441  -WDSIGRASDADKVEAAWESVRRGKTARFEISVRDAGGEERCMDVISAPITDHHGKPFRI 499
             +   G  +  ++ +  + +        FE+  R   GE     V  +   +  G+P  +
Sbjct: 206  LYADDGSETLEEEDDLFYNAFLDHGRREFEVRRRKKSGEVFWASVSLSLSRNEAGEPAGL 265

Query: 500  LSIWRDITDAKRASDEISRAQRHAEAAADQLSSVLESTMDSVMLLDADWRVRYLNENARK 559
            +    DIT+     +++   + HA+        + E   ++V++ DA  RV  +N+    
Sbjct: 266  IGYLVDITNQLEREEKL---RLHAK--------IFEHNSEAVIVTDAMQRVLSVNKAFCD 314

Query: 560  LLQVGDEALGRVFWKLF-PEEEEGSFAKHCR-----------EVMDRRVRSFFEDHLSSL 607
            +    +  +      L  P  ++ + A   +           E+ DRR          + 
Sbjct: 315  ITGFSEAEVRMSLPALLQPTRDDPNLAAEIQVALASSGAWQGELWDRRKNG------DTY 368

Query: 608  GRWVEANASPTRDGIS----IFCRDITERRRAEEDTLLAQKQMAHMARHDMLTGLANRMF 663
              WV  ++     GI     +   DI+ER+ AE       +Q+  +A +D LTGL NR  
Sbjct: 369  PVWVSISSVKNTRGILSHYFLVFSDISERKEAE-------RQIYRLAYYDALTGLPNRSL 421

Query: 664  FRECFEEALNES--NHARMAVLCLDLDGFKAVNDTLGHPAGDALLRQVSTRLIQAVRTTE 721
                 E+AL E+  N    AVL +DLD FK +ND+ GH   DALL++V+ RL + +R  +
Sbjct: 422  LFSLLEQALIEAQRNQTHGAVLFVDLDRFKTINDSFGHAPADALLKEVARRLQETLRAED 481

Query: 722  TVARLGGDEFAIIQPLTESRDEAFRLAQRLIDTLSEPFSIEGAAANVGTSIGIAFAPEDG 781
             VARLGGDEF +       R+ A  + Q+++D L+EPF I      +  SIGIA  P+DG
Sbjct: 482  VVARLGGDEFIVALFDITKREHAALVGQKILDALAEPFQIVHHEVLLTASIGIAVFPDDG 541

Query: 782  TSADELIKAADIALYSAKSSGRGTYKLFDVAMHAQLQAHQQMKITMRDALAKGEFELHYQ 841
              A+ L++ AD A+Y  K +  G    +   M+ +     +++  +R A+ + EF L+YQ
Sbjct: 542  RDAETLLRNADTAMYRVKQTSGGPL-FYSQEMNLRSLERLKLEGALRKAVERQEFRLYYQ 600

Query: 842  PLVSLESRCVSCCEALLRWRHPERGMIAPSEFIPIAEETGLIVPIGEWILGEACRQAARW 901
            P V L +  +   EAL+RW HPE+GMI P+ FIP+AEETGLIV IG W+L  ACRQ   W
Sbjct: 601  PQVELATGRIVGAEALIRWHHPEQGMIPPTAFIPLAEETGLIVSIGAWVLDAACRQGRLW 660

Query: 902  PER----VSVAVNLSPVQFKHRNLVRAVAKALSATRLDPARLQLEITETVLLDESEHNLE 957
             E     +++AVNLSP QF+   L + V + L         L+LEITE +L+  SE  ++
Sbjct: 661  REAGYEDLTIAVNLSPRQFRP-GLSQLVNETLERHAFPGENLELEITEGMLMHNSEAVIQ 719

Query: 958  LLQDLRRLGVKIAMDDFGTGYSSLGYLRSFPFDKIKVDQAFVRDLPHGKESLAIVKAVAG 1017
            +L+D  + GV++A+DDFGTGYSSL YL+ FP D +K+D++FV  +PH  +  AI KA+  
Sbjct: 720  MLEDFHQAGVRLALDDFGTGYSSLAYLKKFPIDNLKIDRSFVSGIPHDGDDSAIAKAIIS 779

Query: 1018 LGQSLGMTTSVEGVETEDQLAVVDSEGFNEVQGYLFSRPLPAAEISKLI 1066
            + ++L +    EGVETE+QL  + + G +E+QGYLFS P+P  +   L+
Sbjct: 780  MAKNLRLLVIAEGVETEEQLDFLRAAGCDEIQGYLFSPPVPVEDFQLLL 828



 Score = 40.8 bits (94), Expect = 4e-07
 Identities = 56/249 (22%), Positives = 97/249 (38%), Gaps = 17/249 (6%)

Query: 19  RLMDGIAEPVIIKDDASRFVFINDAACDLLGKDRNQLIGRTDHDILPGEQADRIVSLDRI 78
           +++D I + VI  D +   +  N  A  L G    + +GR    +   + ++ +   D +
Sbjct: 162 QILDHIHDSVITMDLSGYIMGWNKGAERLFGYTAAEAVGRHILFLYADDGSETLEEEDDL 221

Query: 79  VLSTSEGH---ELEEQITTPDG----TQRTLLTKKRCVSIPAGSTQEKFVVVTIVDITNL 131
             +    H   E E +     G       +L   +     PAG      ++  +VDITN 
Sbjct: 222 FYNAFLDHGRREFEVRRRKKSGEVFWASVSLSLSRNEAGEPAG------LIGYLVDITNQ 275

Query: 132 RRTEETLRASEEHYRSLVDLHPQVPWTADTAGEVLEVGPRWSELTGLGEKETLGSGWAKA 191
              EE LR     +  + + + +     D    VL V   + ++TG  E E   S  A  
Sbjct: 276 LEREEKLRL----HAKIFEHNSEAVIVTDAMQRVLSVNKAFCDITGFSEAEVRMSLPALL 331

Query: 192 VHPQDAGALQEEWRRSLASGAPFDCEYRLLTKTGDYRWFRARAAAKRDADGKIVRWYGVL 251
              +D   L  E + +LAS   +  E     K GD        ++ ++  G +  ++ V 
Sbjct: 332 QPTRDDPNLAAEIQVALASSGAWQGELWDRRKNGDTYPVWVSISSVKNTRGILSHYFLVF 391

Query: 252 EDIDERRRA 260
            DI ER+ A
Sbjct: 392 SDISERKEA 400



 Score = 36.6 bits (83), Expect = 8e-06
 Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 12/178 (6%)

Query: 262 DDLRESEARFRA---IADDAPVMIWVADPTGDTSFFNRLWLETTGQTEAEALGFGWVDVI 318
           +DL   EA+      I D     +   D +G    +N+      G T AEA+G   + + 
Sbjct: 148 EDLARMEAKVEEQSQILDHIHDSVITMDLSGYIMGWNKGAERLFGYTAAEAVGRHILFLY 207

Query: 319 HPDDRQAVQET---FFRATAGKEPVRSEYRLRRADGSWAWV-IDVGQPRFSADGTFLGYV 374
             D  + ++E    F+ A         E R R+  G   W  + +   R  A G   G +
Sbjct: 208 ADDGSETLEEEDDLFYNAFLDHGRREFEVRRRKKSGEVFWASVSLSLSRNEA-GEPAGLI 266

Query: 375 GSVLDITERRAAEIAQQEAQAFIRSIFDSSPDCVRVLDMEGRPLLMNEAGRRIFGLNE 432
           G ++DIT     ++ ++E       IF+ + + V V D   R L +N+A   I G +E
Sbjct: 267 GYLVDITN----QLEREEKLRLHAKIFEHNSEAVIVTDAMQRVLSVNKAFCDITGFSE 320