Pairwise Alignments
Query, 1071 a.a., Diguanylate cyclase/phosphodiesterase from Sinorhizobium meliloti 1021
Subject, 953 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS
Score = 384 bits (987), Expect = e-110
Identities = 252/699 (36%), Positives = 379/699 (54%), Gaps = 45/699 (6%)
Query: 386 AEIAQQEAQAFIRSIFDSSPDCVRVLDMEGRPLLMNEAGRRIFGLNEGAPVTGQTWDSIG 445
A+ QE F+ ++ ++ P + D +GR + NEA G E + G++ +
Sbjct: 268 ADAQLQEHVQFMHTLIEAIPSPLFYKDAQGRYVGCNEAFLTYLG-KERHELLGKSVYDLA 326
Query: 446 RASDADKVEAAWESV--RRGKTARFEISVRDAGGEERCMDVISAPITDHHGKPFRILSIW 503
AD AA + GK +E A G + + A D G+ ++ +
Sbjct: 327 PKELADIYAAADRQLFDNPGKQV-YESQACYADGSKHDVIYNKATFMDAEGRVAGLVGVM 385
Query: 504 RDITDAKRASDEISRAQRHAEAAADQLSSVLESTMDSVMLLDADWRVRYLNENARKLLQV 563
DIT+ KR +E+ A + V +++ ++ ++ DAD +R +N +
Sbjct: 386 VDITERKRQEEELRLAAK-----------VFDTSNEAFLVTDADNNIRSVNRAFCETTGY 434
Query: 564 G-DEALGRVFWKLFPEEEEGSFAKHCREVMDRRV--RSFFEDHLSS---LGRWVEANASP 617
+E LGR L + +F + E ++ + + D S +W N
Sbjct: 435 SAEEVLGRNPRLLSSGHHDKTFYRQMWEALNSQGYWQGEIYDRRKSGEIYPKWTRINVVK 494
Query: 618 TRDG-----ISIFCRDITERRRAEEDTLLAQKQMAHMARHDMLTGLANRMFFRECFEEAL 672
G +++F DI++R+ EE ++ +A+HD LTGL NR R E+A+
Sbjct: 495 DDQGRVVNHVAVFS-DISDRKALEE-------RLQFLAQHDHLTGLPNRNLLRLRLEQAV 546
Query: 673 NESNHAR------MAVLCLDLDGFKAVNDTLGHPAGDALLRQVSTRLIQAVRTTETVARL 726
+ +A+L LDLD FK +ND+LGH AGD LLR V RL +R + T+ R
Sbjct: 547 ESAMERGAGGINPVALLLLDLDHFKTINDSLGHHAGDQLLRTVVKRLKNILRESSTLCRQ 606
Query: 727 GGDEFAIIQPLTESRDEAFRLAQRLIDTLSEPFSIEGAAANVGTSIGIAFAPEDGTSADE 786
GGDEF I+ P + R A+ ++ L+ PF ++G ++ SIGI+ AP+DG+ D
Sbjct: 607 GGDEFLIVLPQAQDLARVSRAAETVLAALATPFEVDGHPLSITGSIGISLAPDDGSDFDT 666
Query: 787 LIKAADIALYSAKSSGRGTYKLFDVAMHAQLQAHQQMKITMRDALAKGEFELHYQPLVSL 846
L+K AD AL AK SGR Y+ F AM+ ++ + AL + E L+YQP + L
Sbjct: 667 LLKKADTALVHAKQSGRNAYRFFTEAMNVSTLERLTLQQRLHQALERQELVLYYQPQLDL 726
Query: 847 ESRCVSCCEALLRWRHPERGMIAPSEFIPIAEETGLIVPIGEWILGEACRQAARWPER-- 904
S V EALLRWR PE G++ P +FIP+AEETGLIVP+G W++ EACRQA W +
Sbjct: 727 ASGRVVGVEALLRWRTPE-GLVPPGKFIPLAEETGLIVPMGAWVIQEACRQARTWLDAGL 785
Query: 905 --VSVAVNLSPVQFKHRNLVRAVAKALSATRLDPARLQLEITETVLLDESEHNLELLQDL 962
+++AVNLS +QF NL+ V ALSA L A L+LE+TE++L+ ++E L L+ +
Sbjct: 786 PPMTMAVNLSALQFHRDNLLITVGDALSAASLPAASLELELTESILIQDAEATLATLKAM 845
Query: 963 RRLGVKIAMDDFGTGYSSLGYLRSFPFDKIKVDQAFVRDLPHGKESLAIVKAVAGLGQSL 1022
+GV +++DDFGTGYSSL YL+ F DK+K+DQ+FVRD+ +S AIV+AV + SL
Sbjct: 846 NAMGVLLSIDDFGTGYSSLAYLKRFTVDKLKIDQSFVRDITSDGDSAAIVRAVVQMASSL 905
Query: 1023 GMTTSVEGVETEDQLAVVDSEGFNEVQGYLFSRPLPAAE 1061
+ T EGVETE Q A + + G +EVQGYL++RP+PAAE
Sbjct: 906 KLKTIAEGVETESQAAALRATGCDEVQGYLYARPMPAAE 944
Score = 75.9 bits (185), Expect = 1e-17
Identities = 62/248 (25%), Positives = 104/248 (41%), Gaps = 10/248 (4%)
Query: 20 LMDGIAEPVIIKDDASRFVFINDAACDLLGKDRNQLIGRTDHDILPGEQADRIVSLDRIV 79
L++ I P+ KD R+V N+A LGK+R++L+G++ +D+ P E AD + DR +
Sbjct: 282 LIEAIPSPLFYKDAQGRYVGCNEAFLTYLGKERHELLGKSVYDLAPKELADIYAAADRQL 341
Query: 80 LSTSEGHELEEQITTPDGTQRTLLTKKRCVSIPAGSTQEKFVVVTIVDITNLRRTEETLR 139
E Q DG++ ++ K G +V +VDIT +R EE LR
Sbjct: 342 FDNPGKQVYESQACYADGSKHDVIYNKATFMDAEGRVAG--LVGVMVDITERKRQEEELR 399
Query: 140 ASEEHYRSLVDLHPQVPWTADTAGEVLEVGPRWSELTGLGEKETLGSGWAKAVHPQDAGA 199
+ + + D + D + V + E TG +E LG
Sbjct: 400 LAAK----VFDTSNEAFLVTDADNNIRSVNRAFCETTGYSAEEVLGRNPRLLSSGHHDKT 455
Query: 200 LQEEWRRSLASGAPFDCEYRLLTKTGDY--RWFRARAAAKRDADGKIVRWYGVLEDIDER 257
+ +L S + E K+G+ +W R +D G++V V DI +R
Sbjct: 456 FYRQMWEALNSQGYWQGEIYDRRKSGEIYPKWTRINVV--KDDQGRVVNHVAVFSDISDR 513
Query: 258 RRAADDLR 265
+ + L+
Sbjct: 514 KALEERLQ 521
Score = 46.2 bits (108), Expect = 1e-08
Identities = 83/353 (23%), Positives = 132/353 (37%), Gaps = 34/353 (9%)
Query: 197 AGALQEEWRRSLASGAPFDCEYRLLTKTGDY----RWFRARAAAKRDADGKIVRWYGVLE 252
A A E SL +GA LL+ D R R AAA+R +G + G+
Sbjct: 181 AAARSEAVEESLKTGALAVLGALLLSLLLDLWVTRRLQRISAAARRLGEGHLNERIGMAG 240
Query: 253 D---------IDERR----RAADDLRESEARFR-------AIADDAPVMIWVADPTGDTS 292
D DE R D L++++A+ + + + P ++ D G
Sbjct: 241 DDEIATLARQFDETAASLARKQDALQQADAQLQEHVQFMHTLIEAIPSPLFYKDAQGRYV 300
Query: 293 FFNRLWLETTGQTEAEALGFGWVDVIHPD--DRQAVQETFFRATAGKEPVRSEYRLRRAD 350
N +L G+ E LG D+ + D A + GK+ S+ AD
Sbjct: 301 GCNEAFLTYLGKERHELLGKSVYDLAPKELADIYAAADRQLFDNPGKQVYESQACY--AD 358
Query: 351 GSWAWVIDVGQPRFSADGTFLGYVGSVLDITERRAAEIAQQEAQAFIRSIFDSSPDCVRV 410
GS VI A+G G VG ++DITER+ Q+E +FD+S + V
Sbjct: 359 GSKHDVIYNKATFMDAEGRVAGLVGVMVDITERK----RQEEELRLAAKVFDTSNEAFLV 414
Query: 411 LDMEGRPLLMNEAGRRIFGLNEGAPVTGQTWDSIGRA-SDADKVEAAWESVRRGKTARFE 469
D + +N A G + V G+ + D WE++ + E
Sbjct: 415 TDADNNIRSVNRAFCETTGYS-AEEVLGRNPRLLSSGHHDKTFYRQMWEALNSQGYWQGE 473
Query: 470 ISVRDAGGEERCMDVISAPITDHHGKPFRILSIWRDITDAKRASDEISRAQRH 522
I R GE + D G+ ++++ DI+D K + + +H
Sbjct: 474 IYDRRKSGEIYPKWTRINVVKDDQGRVVNHVAVFSDISDRKALEERLQFLAQH 526