Pairwise Alignments

Query, 487 a.a., monovalent cation/H+ antiporter subunit D from Sinorhizobium meliloti 1021

Subject, 496 a.a., proton-translocating NADH-quinone oxidoreductase, chain M from Synechococcus elongatus PCC 7942

 Score =  131 bits (329), Expect = 6e-35
 Identities = 119/434 (27%), Positives = 203/434 (46%), Gaps = 38/434 (8%)

Query: 64  RLFEVLP-----GIDVALRADALGMVFATVSSLLWIVAAVYSIGYMRHLHEHAQTRFFAC 118
           +L E LP     G+   L  D L +    +++LL  +      G  R   +  ++R +  
Sbjct: 58  QLLEQLPWIEQLGLGYRLGVDGLSLPLVGLNALLTFLIIA---GLER---QEQRSRLYYG 111

Query: 119 FATSLAAAVGGAFAA-NLFTLVIFYEVLSLVTYPLVYHHEDEEGWRGSRKYLVYLMGASK 177
               L+ AV GAF A +L    +FYEV  +  Y L+           + K+L+Y   +  
Sbjct: 112 LMLLLSGAVSGAFLAQDLLLFFVFYEVELIPLYLLISIWGGARRGYAATKFLIYTALSGA 171

Query: 178 SVLLAALALTYHIAGSLDFVRGGLLTGANASATLLTVVYFCYLFGFAKAAVMPMHAWLPA 237
            +L+  LALT  ++G+  F     L      A  +T++    +    K  ++P H WLP 
Sbjct: 172 LLLIGFLALTI-LSGAGSFAYNPNLAAVLPIAQQVTLLVLILVAFGIKTPIVPFHTWLPD 230

Query: 238 AMV-APTPVSALLHAVAVVKMGVFCVLRVIFHVFGVSTVGELGLGVAT--AYLVSFTILM 294
           A V A TPVS +L  V ++K+G + +LR     FG+    ++   VA   A L   + L 
Sbjct: 231 AHVEASTPVSMMLAGV-LLKLGTYGILR-----FGLGLFPQVWPIVAPWLAGLAVVSTLY 284

Query: 295 ASVYALTRDDLKARLAYSTVSQLSYIVLGAVLLSPLAMVGGIIHIAAHAFSKITLFFCAG 354
            S+ A+ + D+K  +AYS++  + YI+L A   +PL+++G +  + +H      LF   G
Sbjct: 285 GSLSAIVQQDMKKMVAYSSIGHMGYILLAAAAATPLSLLGAVCQMISHGLISALLFLEVG 344

Query: 355 SIYCASGKRNISDMAGI---GRRLPWTMGAFFVASLSMIGIPPTAGFVSKWYLAEGSVEA 411
            +Y  +G R++  + G+    R LP       +A ++  G+P   GF++++ +  GS   
Sbjct: 345 FVYSRTGTRDLRVLQGLLTPERGLPIVGSLMILAVMASGGLPGMVGFIAEFMIFRGSFST 404

Query: 412 GQMAFLAVLLASSVLNAAYFLPVSYTAFFEAETKESRAP--VREIPLVA----IPLVATA 465
             +  L  ++ +  L + YFL +   AFF       R P  +  +P VA    IP +  A
Sbjct: 405 FTVQTLFCMVGTG-LTSVYFLLLVNRAFF------GRLPDQMETLPNVALREHIPALMLA 457

Query: 466 ILSVLMGIFPYYFV 479
            L V+ G+ P + V
Sbjct: 458 TLIVIFGVQPQWLV 471