Pairwise Alignments

Query, 491 a.a., NuoM2 NADH-ubiquinone/plastoquinone (complex I) oxidoreductase from Sinorhizobium meliloti 1021

Subject, 496 a.a., proton-translocating NADH-quinone oxidoreductase, chain M from Synechococcus elongatus PCC 7942

 Score =  292 bits (748), Expect = 2e-83
 Identities = 173/490 (35%), Positives = 262/490 (53%), Gaps = 16/490 (3%)

Query: 5   LLSLIVFVPVAGAAVLMFMRSDDAVRWTALGFGIVD---LALCVVMLAGFDTTTHEMQFT 61
           +LS ++++P+  A VL+      +  W      I     LA+ + +   FD   H+ Q  
Sbjct: 1   MLSALIWLPIVAATVLLCWPGTLSAAWAQRSAAIAAGAALAIAIALFFQFDPQIHDWQLL 60

Query: 62  ESRPWVPALGITYALGVDGISALFLFLTALLSLISVLASWVAIDRKVKEFMVSLLVMQAL 121
           E  PW+  LG+ Y LGVDG+S   + L ALL+ + ++A     +++ + +   +L++   
Sbjct: 61  EQLPWIEQLGLGYRLGVDGLSLPLVGLNALLTFL-IIAGLERQEQRSRLYYGLMLLLSGA 119

Query: 122 MLGVFCALDLFLFYVFWEAMLIPMYLIIGVWGGEGRVYAAFKFFLYTLAGSILFLIGVIV 181
           + G F A DL LF+VF+E  LIP+YL+I +WGG  R YAA KF +YT     L LIG + 
Sbjct: 120 VSGAFLAQDLLLFFVFYEVELIPLYLLISIWGGARRGYAATKFLIYTALSGALLLIGFLA 179

Query: 182 L-YFQGGETFDILALTGQDLPFGVQSWLFFAFLVAFAVKVPMVPVHTWLPDAHVQAPTAG 240
           L    G  +F         LP   Q  L    LVAF +K P+VP HTWLPDAHV+A T  
Sbjct: 180 LTILSGAGSFAYNPNLAAVLPIAQQVTLLVLILVAFGIKTPIVPFHTWLPDAHVEASTPV 239

Query: 241 SIILAGVLLKMGAYGFLRFSLPMLPEASLYYSTLMLALSALAIVYGGLLALAQDDLKKLV 300
           S++LAGVLLK+G YG LRF L + P+     +  +  L+ ++ +YG L A+ Q D+KK+V
Sbjct: 240 SMMLAGVLLKLGTYGILRFGLGLFPQVWPIVAPWLAGLAVVSTLYGSLSAIVQQDMKKMV 299

Query: 301 AYSSISHMGFVTLGIFALNLRGLEGSILQMFNHGITTGALFLFVGLIYERTHTRSIANYG 360
           AYSSI HMG++ L   A     L G++ QM +HG+ +  LFL VG +Y RT TR +    
Sbjct: 300 AYSSIGHMGYILLAAAAATPLSLLGAVCQMISHGLISALLFLEVGFVYSRTGTRDLRVLQ 359

Query: 361 GLM---KAAPVYTAFLALFTLSSMALPGTNAFVGELLVLSGGFAANLAAGAAAVVGALLS 417
           GL+   +  P+  + + L  ++S  LPG   F+ E ++  G F+         +VG  L+
Sbjct: 360 GLLTPERGLPIVGSLMILAVMASGGLPGMVGFIAEFMIFRGSFSTFTVQTLFCMVGTGLT 419

Query: 418 AAYLLGMYGKVALG--PPSVSARYEIHDVNGREMAAILPLAIFVLWVGLYPR---PFLEI 472
           + Y L +  +   G  P  +     + +V  RE    L LA  ++  G+ P+    + E 
Sbjct: 420 SVYFLLLVNRAFFGRLPDQMET---LPNVALREHIPALMLATLIVIFGVQPQWLVVWTEP 476

Query: 473 IDASVRNLLV 482
             A++ NL V
Sbjct: 477 ATAALGNLAV 486