Pairwise Alignments

Query, 318 a.a., AraC family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 314 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas fluorescens FW300-N2E2

 Score =  186 bits (473), Expect = 5e-52
 Identities = 104/304 (34%), Positives = 165/304 (54%), Gaps = 2/304 (0%)

Query: 1   MFPNFPLMAFSSVIEPLRAANTLSGRRCYSWLTVAA-GEKISASNGIGIEPDFHVRNAPE 59
           + P F  + F S IEPLR AN   G   Y W  ++  G  + ASNG+ +  D  +    +
Sbjct: 9   LMPGFSAIGFISAIEPLRVANRFRGE-LYRWHVLSVDGGPVLASNGMSVNADAALEPLKK 67

Query: 60  VDRIVVCSGGDAEHLVADEEMAWIRKNLRAGAQLGAVADAAFFLARKGLLDGHSCTLHWT 119
              + V +G +           W+ +    G  LG +   +  LA  GLL+GH  TLHW 
Sbjct: 68  GATLWVVAGFEPLEFSTPTLERWLHRLDNEGVTLGGIDTGSVVLAEAGLLEGHRVTLHWE 127

Query: 120 SQPAFKEAFPHLDMRSDLYVIDRRRFTSVGGIGSLDMMLDMIGRDYGAELADGVAGWFMH 179
           +  AFKE++P L +  +L+ IDRRR T  GG  S+D+MLD+IG+ +G+ELA  V+  F+ 
Sbjct: 128 AIEAFKESYPQLSVTQELFEIDRRRITCAGGTASIDLMLDLIGQAHGSELAIQVSEQFVL 187

Query: 180 SPLRPDADRRKLTLRIRSGIADDLVLSAVAMMEDAIEDVLRIEDLASRLNVSSDKLERAF 239
             +RP  D +++ +  R GI +  ++  +  ME   E  L    LA  + V+  +LER F
Sbjct: 188 GRIRPRKDHQRMEIANRYGIRNKKLVHVIGEMETHSEPPLSTLALAESIGVTRRQLERLF 247

Query: 240 KAELGVSPNSYYRNLRLGHAADMLTHSNLKVNEVAVACGFVNAANFSRAFKEQFGYVPHS 299
           +  L  +P+++Y  LRL  A  +L  +++ V EV++ACGF + + F+R+++ +F   P  
Sbjct: 248 RLHLNDTPSNFYLRLRLEKAQQLLRQTDMSVLEVSIACGFESPSYFTRSYRARFARCPRE 307

Query: 300 VRRR 303
            RRR
Sbjct: 308 DRRR 311