Pairwise Alignments

Query, 318 a.a., AraC family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 332 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas stutzeri RCH2

 Score =  105 bits (261), Expect = 2e-27
 Identities = 79/309 (25%), Positives = 137/309 (44%), Gaps = 7/309 (2%)

Query: 1   MFPNFPLMAFSSVIEPLRAANTLSGRRCYSWLTVAAGEKISASNGI-GIEPDFHV----R 55
           ++P   L A   + +    AN ++  R  + L        S  +G  GI+  F      +
Sbjct: 14  LYPGAQLAAVYGLTDLFSVANRMAAERGAAKLPTLRVTHWSLQDGTSGIQRVFDSLPGSQ 73

Query: 56  NAPEVDRIVVCSGGDAEHLVADEEMAWIRKNLRAGAQLGAVADAAFFLARKGLLDGHSCT 115
            +P +  +  C     E  V     AW+ +  +AG  LG+V   AF LA  GLLDG + T
Sbjct: 74  RSPRIIILPPCLEARPEAHVIQPFAAWLGQCHQAGVTLGSVCAGAFLLAETGLLDGRTVT 133

Query: 116 LHWTSQPAFKEAFPHLDMRSDLYVIDRRRFTSVGGIGS-LDMMLDMIGRDYGAELADGVA 174
            HW    A +E FP++ + +D  ++D     + GG+ +  D+ L ++ R  G  +A   A
Sbjct: 134 THWGLAQALRERFPNVQVDADRMIVDDGDIITAGGLMAWTDLGLALVERLLGPTIASETA 193

Query: 175 GWFMHSPLRPDADRRKLTLRIRSGIADDLVLSAVAMMEDAIEDVLRIEDLASRLNVSSDK 234
            + +   L   + R   +   R    D+ VL     ++      + +  +A++  +    
Sbjct: 194 RYLV-IDLTRQSQRYFSSFAPRLDHGDEAVLRVQRWLQSQSASAVPVAAMAAQAGMGERT 252

Query: 235 LERAFKAELGVSPNSYYRNLRLGHAADMLTHSNLKVNEVAVACGFVNAANFSRAFKEQFG 294
             R F+A  G+ P  Y + LR+G A ++L  +N  + +VA A G+ +   F + F+   G
Sbjct: 253 FLRRFRAATGLKPTEYCQQLRVGKARELLELTNRGIEQVAWAVGYQDPGAFRKVFQRLVG 312

Query: 295 YVPHSVRRR 303
             P   RRR
Sbjct: 313 LSPGDYRRR 321