Pairwise Alignments

Query, 220 a.a., inner-membrane permease from Sinorhizobium meliloti 1021

Subject, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

 Score =  104 bits (259), Expect = 2e-27
 Identities = 57/178 (32%), Positives = 100/178 (56%), Gaps = 5/178 (2%)

Query: 22  ISIVFLAVGIAIATAVPIGVAITQSKSTADTVLYLASMMITVPSIALFGLMIPLLSPIGH 81
           +S++  +  IA+   +P+G+   +SK  +  +  +  +M T+PS+A    +IP +  +  
Sbjct: 94  LSLIITSTLIALLLGIPLGIVKARSKLVSTLLDPMLDVMQTLPSLAY---LIPAV--LFF 148

Query: 82  GIGYVPAVVAVILYSQLPIIRNTYTAITNVDPALREAAKGMGMSTWQRLRQVEIPLAIPV 141
           GIG VP V+A ++++  P I+ T   I  V   L E  +  G ++WQ L ++E+P A+P 
Sbjct: 149 GIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRAFGGTSWQILTKIELPTAVPS 208

Query: 142 IMAGVRTAVVMNIGVTAIAAYIGAGGLGTFISRGISQSDPRQLVTGALAVSLLAIAAD 199
           IM GV  A++++  +  IA +IG+GGLG  I  GI +      +   +AV+ LA+  D
Sbjct: 209 IMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYSLAPALEAGIAVTFLAVIFD 266