Pairwise Alignments

Query, 347 a.a., AraC family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 338 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

 Score =  207 bits (528), Expect = 2e-58
 Identities = 121/329 (36%), Positives = 183/329 (55%), Gaps = 7/329 (2%)

Query: 2   ERRMIAPCFMDDTLECLRRHGVDAGPLLAQAGL-PSIVTGP---VSANQYGAFWHAVAQA 57
           E   +A  FM   +  LR        +L Q G+ P+++  P   V A  + A W    + 
Sbjct: 3   ETDSVAVYFMYPMIHALREEPQRLRSVLEQVGIDPALMDKPTARVPATAFAALWLVQIRE 62

Query: 58  MDDEFFGEGARPMRAGSFALLCHAILSTATLEHALRRALRFLRVVLENPHGELVVENGLA 117
           ++DEFF   +  M  GSFAL+C A++   TLE A+R+ L    + L +  G L V    A
Sbjct: 63  LNDEFFRLDSHGMPPGSFALICRALIQEPTLEKAMRQCLANFALFLSDFRGTLSVRGKRA 122

Query: 118 QIVLKDAGATR--SAFAYRTFWIILHGVNCWLIGRRLPIRWVDFRCSAPPAGTDYRLFFG 175
            I L+        S     TF +++  + CWL GRR+PI   DFR        D  L+ G
Sbjct: 123 VISLQTRAQDNEVSRLGEETFLVLMISLLCWLGGRRIPIDRADFRHQRLSLRDDAMLW-G 181

Query: 176 APVHFDQRRTRLVFDAEYLKLPPIRDERALKHFLRHAPANILVRYRHDAGLSAAIRQRLH 235
             + F   RT + F + YL+LP I+D  +LK FLR AP  +++R+R+  GL++ + QRL 
Sbjct: 182 PNLTFGTERTEIEFASHYLRLPVIQDLASLKVFLRTAPQWLVIRFRNQHGLTSQVHQRLR 241

Query: 236 ATAPSAWPGFEAIAARMRIAAPTLRRRLRQEGQTYRSIKEDLRRALAMEALADGRTNVAQ 295
            +  S WP  +A A    ++  T RR+L +EG +Y+ IK+++RRA+A E L   + +++ 
Sbjct: 242 HSHYSEWPTLQAFALEQHLSPSTFRRKLGREGCSYQEIKDEVRRAVAFERLRQSKASISD 301

Query: 296 LAVELGFSEPSAFHRAFRKWTGKSPAQFR 324
           +A +LGF EPSAFHRAF+KWTG+SP ++R
Sbjct: 302 IAEQLGFQEPSAFHRAFKKWTGESPGRYR 330