Pairwise Alignments

Query, 347 a.a., AraC family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 347 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

 Score =  140 bits (354), Expect = 4e-38
 Identities = 99/313 (31%), Positives = 148/313 (47%), Gaps = 8/313 (2%)

Query: 20  RHGVDAGPLLAQAGLPSIVTGP----VSANQYGAFWHAVAQAMDDEFFGEGARPMRAGSF 75
           R G D   LLA AG+P+         ++ +Q      AV +A  DEF G   R  + G F
Sbjct: 29  RQGADPLQLLAAAGIPAHWLDQPERLITEHQLSELIKAVWRATADEFMGMAPRACKRGVF 88

Query: 76  ALLCHAILSTATLEHALRRALRFLRVVLENPHGELVVENGLAQIVLKDAGATRSA----F 131
           +L+    L   TL   L R+ RF   V ++    L +    + +V       +      F
Sbjct: 89  SLMAEFALGAKTLGGMLERSARFYTAVRDDLDIGLDLAPAQSPLVFYRLHLHQQFDPDHF 148

Query: 132 AYRTFWIILHGVNCWLIGRRLPIRWVDFRCSAPPAGTDYRLFFGAPVHFDQRRTRLVFDA 191
                 ++      WLIG+++P+    F   AP    +YR+ F   +H DQ R       
Sbjct: 149 LQEFILLMWQRFAGWLIGQQIPVVATCFGYPAPSHAAEYRVMFIGELHHDQPRCGFYLHP 208

Query: 192 EYLKLPPIRDERALKHFLRHAPANILVRYRHDAGLSAAIRQRLHATAPSAWPGFEAIAAR 251
             L+LP +R +  L+ FLR  P  IL R   D  L   +R  L        P    I+ +
Sbjct: 209 RVLQLPILRSDTELQAFLRDCPGVILHRPVQDNSLQTRVRLLLQHYDLRHMPELGEISQQ 268

Query: 252 MRIAAPTLRRRLRQEGQTYRSIKEDLRRALAMEALADGRTNVAQLAVELGFSEPSAFHRA 311
           + +   TLRRRL+ EG + R IKE LRR  A+  L++   +V ++A + GF+E +AF RA
Sbjct: 269 LLMTPRTLRRRLQDEGTSVRQIKESLRREFALRLLSNEHLSVQEVAEQSGFAEVAAFCRA 328

Query: 312 FRKWTGKSPAQFR 324
           F++WTG+ PAQ+R
Sbjct: 329 FKRWTGRPPAQWR 341