Pairwise Alignments

Query, 502 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 97.1 bits (240), Expect = 1e-24
 Identities = 120/483 (24%), Positives = 207/483 (42%), Gaps = 55/483 (11%)

Query: 19  AGYAAAQSASEIKIVLPEQPANLEPCGTIITNVGQILSRNVVEPLTIIDPKSGQPTPGLA 78
           AG +    A++I +     P +++P   +     Q LS  V +PL     K  +  P LA
Sbjct: 15  AGLSFGAMAADITVAYDADPVSMDPHEQLSGGTLQ-LSHMVFDPLIRFTQKM-EFEPRLA 72

Query: 79  TEWKQTDPNTWQLKLREGVKFQDGAAFDAEAVKFSIERMTGGKLTCSNIAKFGDAKLTVT 138
             W++ D  T +  LR+GVKF  G  F A+ V ++  R+       ++     +  +++T
Sbjct: 73  ESWQRVDNETMRFTLRKGVKFHSGNDFTADDVVWTFNRLK----ESADFKGIFEPLVSLT 128

Query: 139 PLDELTVEIKSDKPQPILPTLLSVVMIVS----PNTPADK-------------AVNDPVG 181
            +D+ T+EIK+    P++  + + +  +       T AD              A  +  G
Sbjct: 129 KVDDYTIEIKTAGTYPLIENVATYIFPMDSKFYTGTTADGKNKAEIVKHGNSFASENISG 188

Query: 182 TGPFKLSSFTPQTVVLE--AFDGYW--GEKPAIAKASYVWRPESSIRAAMVETGEADLTP 237
           TGPF +++   Q V LE      YW    K  + K +     E + R A + +G  D+  
Sbjct: 189 TGPFTVTA-REQGVKLEFQRNPNYWDKASKGNVDKLTLAVIKEDATRVAALLSGGVDMIA 247

Query: 238 SIA------IQDATNPETDFAYLNSETTAIRIDAGFAP-LDDVRIRKALNLAIDWDGLA- 289
            ++      I+DA   +  F    +     +++    P L DVR+R+A+  AI+ +G+  
Sbjct: 248 PVSPNDYQRIKDAKGVDL-FTMPGTRVITFQMNQNSNPALKDVRVRQAIVYAINNEGIVD 306

Query: 290 QLFGEDVQRASQMVVTGINGHDDKLAPWTFDAEKARALIAEAKAAGVPVDTEIELIGRNG 349
           ++       A+Q    G  G+++ L P  FD  KA+ L+   K AG      + +I  N 
Sbjct: 307 KVMKGAATTAAQQSPVGYAGYNENLKP-RFDLNKAKELM---KEAGYEKGFNLTMIAPNN 362

Query: 350 IYPNGTEAMEAMMAMWQDVGLNVKL-TMLDVNDWLRYLQKPFPESRGPNLLQMMHDNNKG 408
            Y N  +  +A  AM   +G+ V L TM     W       F +     L+   H + + 
Sbjct: 363 RYVNDEKIAQAASAMLSKIGIKVDLKTMPKAQYW-----PEFDKCAADMLMIGWHPDTED 417

Query: 409 DAAFTIPIFY-----TSAGSYST--FSDAALDKEVADAMAATG-EDRTAKFKAIFAKVHD 460
            A FT  +       T  G Y+   +S+A +DK V  A   T  E R+   K +   +++
Sbjct: 418 SANFTEFLTMTRDSNTGKGQYNCGYYSNAEVDKLVNAANEETDLEKRSTMLKKVEEILYN 477

Query: 461 DLA 463
           + A
Sbjct: 478 EAA 480