Pairwise Alignments

Query, 502 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 529 a.a., extracellular solute-binding protein, family 5 (NCBI) from Rhodospirillum rubrum S1H

 Score =  107 bits (267), Expect = 1e-27
 Identities = 115/482 (23%), Positives = 188/482 (39%), Gaps = 44/482 (9%)

Query: 7   RVIAGAMVVAGWAGYAAAQSASEIKIVLPEQPANLEPCGTIITNVGQILSRNVVEPLTII 66
           +++ GA      A  A+   A  +       P    P            S+N+ + L + 
Sbjct: 3   KIVIGAASAVILAMAASGAQAKTLVYCSEGSPEGFNPAFYTTGTTFDATSKNIFDKLVLF 62

Query: 67  DPKSGQPTPGLATEWKQT-DPNTWQLKLREGVKFQDG------AAFDAEAVKFSIER--- 116
              + +  PGLA  W+ + D  T+   LR+GV F D         F+A+ V +S ER   
Sbjct: 63  KRGTTEIEPGLAESWEVSPDGKTYTFHLRKGVTFHDSDIFKPTRQFNADDVIWSFERQLK 122

Query: 117 -------MTGGKLTCSNIAKFGDAKLTVTPLDELTVEIKSDKPQ-PILPTLLSVVMIVSP 168
                  ++GG                +  +D+ TV     +P+ P+L  L      +  
Sbjct: 123 KDHPYHAVSGGTYDYFEGMSMNTLLEKIEKVDDYTVVFHLSRPEAPMLANLAMDFASIFS 182

Query: 169 NTPADKAVN---------DPVGTGPFKLSSFTPQTVV-LEAFDGYWGEKPAIAKASYVWR 218
              ADK +           P+GTGPF    +     +  EA   YW  K AI +  +V  
Sbjct: 183 AEYADKMMKAGTPEVVDQKPIGTGPFMFRGYQKDAQIRYEANPTYWQGKAAIDRLVFVIT 242

Query: 219 PESSIRAAMVETGEADLTPSIAIQDATNPETDFAY-------LNSETTAIRIDAGFAPLD 271
           P++S+R A ++ GE  + P     D    +TD A        LN    A  ++    P D
Sbjct: 243 PDASVRYAKLKAGECHVMPYPNPADLEAMKTDKAVNLMHQEGLNVGYLAYNVEK--KPFD 300

Query: 272 DVRIRKALNLAIDWDGLAQLFGEDV-QRASQMVVTGINGHDDKLAPWTFDAEKARALIAE 330
           DVR+RKALNLAID   +     +     A+  +   I  ++  +    FD   A+ L+AE
Sbjct: 301 DVRVRKALNLAIDKKAIIDAVYQGAGTAATNPIPPTIWSYNKAVKDDAFDPAAAKKLLAE 360

Query: 331 AKAAGVPVDTEIELIGRNGIYPNGTEAMEAMMAMWQDVGLNVKLTMLDVNDWLRYLQKPF 390
           A    +   T   +  +    PN     E + A W+ VG++ ++T     +W  YL++  
Sbjct: 361 AGVKDLKT-TIWAMPVQRPYNPNARRMAEILQANWKAVGVDAEITSY---EWGEYLKRAK 416

Query: 391 PESRGPNLLQMMHDNNKGD--AAFTIPIFYTSAGSYSTFSDAALDKEVADAMAATGEDRT 448
                  L     DN   D   A  +        +Y+ + D + +  +  A  AT ++  
Sbjct: 417 AGEHETALFGWTGDNGDPDNFLAVLLGCDAIPGNNYARWCDKSFENLIQKAKIATSQEER 476

Query: 449 AK 450
            K
Sbjct: 477 VK 478