Pairwise Alignments

Query, 550 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  444 bits (1141), Expect = e-129
 Identities = 238/529 (44%), Positives = 339/529 (64%), Gaps = 5/529 (0%)

Query: 7   PILRIDKLTVDFLSEGDPVRAVDDVSFDVCPGETLVILGESGSGKSVSTGTVMGLIDCPP 66
           P+L++  L+V F +    V AV +VSFD+ PGETL I+GESGSGKSVST  +M L+    
Sbjct: 5   PLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNA 64

Query: 67  GDIVSGSLVFDGTDLSRLDDEGRRELNGRRIAMIFQDPLAYLNPVYTVGRQIAEVFESHG 126
                 S++F+G +L    D   R + G RI MIFQ+P+  LNP   VG Q+AE    H 
Sbjct: 65  RIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHR 124

Query: 127 EGEGGAVRDKVVRLLERVGIPEADERIDYYPHQFSGGQRQRVMIAMAIALKPDILIADEP 186
                  + +V+ L + V +P+       +PH+FSGGQ QR+MIAMA+  +PDILIADEP
Sbjct: 125 NVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADEP 184

Query: 187 TTALDVSVQAQILELLRDLQRETGMALIMITHDLEVAAAMADRIIVMNGGKVVESGKAED 246
           TTALDV+VQA++L L++++Q   GMA++ ITHDL V   +ADR++VM  G VVE G  E 
Sbjct: 185 TTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTEQ 244

Query: 247 VFTNPSHAYTRRLMSAVPHADAPKAPRNAAQGEVLLQVAHLSKHYKLGSGPFSPKRE-FR 305
           +F  P H YTR L++++P         +AA    LL+   +   + +     S + + F 
Sbjct: 245 LFLQPEHDYTRMLINSIPKGSKDPVAVDAAP---LLKAEDIRVKFLVKPYFISRRNQYFE 301

Query: 306 AVDDVSFTLRRGETVGIVGESGSGKSSIARMLLRLNEPTSGAALFAGEDIFELKGKALDG 365
           AV  +S  L++GET+GIVGESGSGKS++ R L+ L  P++G   F G+D   L  K    
Sbjct: 302 AVKGISLELKQGETLGIVGESGSGKSTLGRALIGL-LPSTGQIAFKGQDFRALSEKQRLA 360

Query: 366 FRRRVQMVFQDPFGSMNPRMNVRSIISEPWAIHRDILPRERWNERVVELLELVGLKAEHA 425
            ++ +QMVFQDP+GS++PRM V  II+E   +H+  + +    +R    LE V L     
Sbjct: 361 LKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDPNSI 420

Query: 426 ARHPHQFSGGQRQRIAIARALASEPELIVCDEAVSALDVSIQMQVIELLADLRQRLGLSY 485
            R+PH+FSGGQRQRIAIARAL  EP  I+ DE  SALD S+Q+ VIELL ++++R  + Y
Sbjct: 421 NRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGY 480

Query: 486 VFITHDLPIVRQFADRILVMQRGRIVEEGETEALFVSPQHEYTQALLRA 534
           +FI+HDL +V+  +DR+LVMQ+G+++E+G  E++F +PQHEYT+ L+ A
Sbjct: 481 LFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAA 529



 Score =  190 bits (483), Expect = 1e-52
 Identities = 106/265 (40%), Positives = 165/265 (62%), Gaps = 15/265 (5%)

Query: 281 LLQVAHLSKHYKLGSGPFSPKREFRAVDDVSFTLRRGETVGIVGESGSGKSSIARMLLRL 340
           LLQV +LS  +    G         AV +VSF +R GET+ IVGESGSGKS     L++L
Sbjct: 6   LLQVRNLSVSFTTNDGVVD------AVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQL 59

Query: 341 NEPTS-----GAALFAGEDIFELKGKALDGFRR-RVQMVFQDPFGSMNPRMNVRSIISEP 394
               +      + +F GE++       +   R  R+ M+FQ+P  S+NP M V   ++E 
Sbjct: 60  LPKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEA 119

Query: 395 WAIHRDILPRERWNERVVELLELVGLKAEHAA--RHPHQFSGGQRQRIAIARALASEPEL 452
              HR++   +   +RV+EL +LV L     A  + PH+FSGGQ QRI IA AL +EP++
Sbjct: 120 IRCHRNVSQNQA-KQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDI 178

Query: 453 IVCDEAVSALDVSIQMQVIELLADLRQRLGLSYVFITHDLPIVRQFADRILVMQRGRIVE 512
           ++ DE  +ALDV++Q +V+ L+ +++  +G++ +FITHDL +V+  ADR+LVM +G +VE
Sbjct: 179 LIADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVE 238

Query: 513 EGETEALFVSPQHEYTQALLRAVPQ 537
           +G TE LF+ P+H+YT+ L+ ++P+
Sbjct: 239 QGSTEQLFLQPEHDYTRMLINSIPK 263