Pairwise Alignments

Query, 313 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  146 bits (369), Expect = 6e-40
 Identities = 94/291 (32%), Positives = 149/291 (51%), Gaps = 3/291 (1%)

Query: 13  ITLTVLVAIVGMADPGFLKPQNLMSLAGDIVPLFIMALGLTFAIYIGGIDLSAQSMANMV 72
           I L  LV +V   +P F    NL+++        I+A+G+T  I   GIDLS  S+  + 
Sbjct: 36  IALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLALC 95

Query: 73  TVIASVYLA-SMGAWVAL-LCVAAGFLLGTLSGYITTRLYVPSFISTLAVGGVAFSVAQW 130
              A+  +A  +   VA+   + AG  LG +SG I  +  V +FI+TL    +   V   
Sbjct: 96  GAFAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLRGVTMV 155

Query: 131 LSGQRALNMDAAQRNETFGWM-IGRTWGVPNELLIAAVLLLVCLFIERRTILGRALKAVG 189
            +  R ++       +TF W   G T G+P  + +  V+     ++   T  GR + AVG
Sbjct: 156 YTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFGRYVYAVG 215

Query: 190 AGELAAAASGLNVARYKILAFAISGALAAIAGLLFAVKLSGGAPTIANGFLLPAIVAVLV 249
             E A   SG+NV R KI  +AI G LAA+AG++   +LS   PT   G+ L AI AV++
Sbjct: 216 GNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELDAIAAVVL 275

Query: 250 GGTPLTGGVGGVLNTVIGTLIVAVIRASMLYFEIDATQQQMVFGIVLIGAI 300
           GGT L GG G ++ T+IG LI+  +  ++   ++ +  Q +   +V++ A+
Sbjct: 276 GGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAV 326