Pairwise Alignments

Query, 491 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 533 a.a., Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  132 bits (333), Expect = 2e-35
 Identities = 122/491 (24%), Positives = 211/491 (42%), Gaps = 47/491 (9%)

Query: 15  LFASTSWAQSITVAI---GSEPSTLDPQLRDDGGERQVN-DNIYEALMARTATG-DLVPG 69
           L +S   AQ+ T  +    + P+  DP     G +   + + ++  L      G ++ PG
Sbjct: 15  LISSAPMAQAATTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNRLTQFKRGGTEVEPG 74

Query: 70  LAADAPTQVDARTWQFKLREGIKFHNGE------PFNADAVVASVLRVIDPANNSEQ--- 120
           LA       D   + F LREG+KFH  +       FNAD V+ +  R++DP +   Q   
Sbjct: 75  LATRWDVSADGLVYTFHLREGVKFHTTDYFSPSRDFNADDVLFTFQRLLDPQHPFRQAYP 134

Query: 121 --------MAYLGPLSGAEKVDDLAVRIITSAPDP--ILPARMYWLKMVPAAYSKN---- 166
                   M     +   EKVD+  VR   +  D   +    M +  +  A Y+      
Sbjct: 135 TESPYFTDMGLNTTIKSVEKVDEHTVRFNLNNVDAAFVQNLAMSFASVQSAEYAAQLLKE 194

Query: 167 --ATAIAEKPVGTGPYKFGTWDRGNSITMTANTDYWGGEP-QIDDVTYRFVSEAGTRLSG 223
             A  + +KP+GTGP+ F  + + + I    NT YW  E  ++D++ +    +A  RL  
Sbjct: 195 GKAGDLNQKPIGTGPFVFKRYQKDSQIRYAGNTAYWKPEDVKLDNLIFSITPDAAVRLQK 254

Query: 224 LVAGEFDVVVNLLPEFADSVPQAKSVS-----GLETSVIILGVDNPAVKDVRVRRALNMA 278
           L  GE  V     P   + + Q  ++      G     +   V +P +  ++VR+AL+MA
Sbjct: 255 LKRGECQVSGYPRPADIEVMEQDPNLQVLKQPGFNLGFLAYNVTHPPLDQLKVRQALDMA 314

Query: 279 IDRHALAESLFAGNAKVTTGQLVLPGAFGYNESLENWPYDPQGAKKLIAEAGAA-GTTID 337
           ID+ A+ ++++    ++    L  P  + ++ ++++ P+D   AK L+ EAG A GTTID
Sbjct: 315 IDKPAIIKAVYQSAGQLAQNALP-PAQWSFDPNIKDAPHDVTKAKALLKEAGVAPGTTID 373

Query: 338 LVGEAGRWLKD---RELIEAVAAYWTEVGLKVNVEILEFSVYLDRIFDMGNRPDSYFVLN 394
           L     +   +   R   + +   W ++G+K N+   E+  Y+ R        D+     
Sbjct: 374 LWAMTVQRASNPNARMSAQMIQQDWAKIGIKANIVSYEWGEYIKRA--KNGEHDAMIYGW 431

Query: 395 SNELFDADREMAFAYE----PGQGGASNSDKALGEAIRAARSEVDGEKRKAAYAVITKKL 450
           + +  D D  +   Y      G   A   D A  + I+ A+   D ++R   Y    K L
Sbjct: 432 TGDNGDPDNWLGVLYSCAAVKGSNYAKWCDPAYDQLIQQAKVSTDRQQRIDLYRQAQKIL 491

Query: 451 HDEAYDVPLLN 461
             +    P+ N
Sbjct: 492 KQQVPITPIAN 502