Pairwise Alignments

Query, 491 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  162 bits (409), Expect = 3e-44
 Identities = 134/485 (27%), Positives = 232/485 (47%), Gaps = 47/485 (9%)

Query: 12  LAVLFASTSW---AQSITVAIGSEPSTLDPQLRDDGGERQVNDNIYEALMARTATGDLVP 68
           LA++ A  S+   A  ITVA  ++P ++DP  +  GG  Q++  +++ L+  T   +  P
Sbjct: 10  LALIAAGLSFGAMAADITVAYDADPVSMDPHEQLSGGTLQLSHMVFDPLIRFTQKMEFEP 69

Query: 69  GLAADAPTQVDARTWQFKLREGIKFHNGEPFNADAVVASVLRVIDPANNSEQMAYLGPLS 128
            LA ++  +VD  T +F LR+G+KFH+G  F AD VV +  R+ + A   +      PL 
Sbjct: 70  RLA-ESWQRVDNETMRFTLRKGVKFHSGNDFTADDVVWTFNRLKESA---DFKGIFEPLV 125

Query: 129 GAEKVDDLAVRIITSAPDPILPARMYWLKMVPAAYSKNATA---------------IAEK 173
              KVDD  + I T+   P++     ++  + + +    TA                +E 
Sbjct: 126 SLTKVDDYTIEIKTAGTYPLIENVATYIFPMDSKFYTGTTADGKNKAEIVKHGNSFASEN 185

Query: 174 PVGTGPYKFGTWDRGNSITMTANTDYW--GGEPQIDDVTYRFVSEAGTRLSGLVAGEFDV 231
             GTGP+     ++G  +    N +YW    +  +D +T   + E  TR++ L++G  D+
Sbjct: 186 ISGTGPFTVTAREQGVKLEFQRNPNYWDKASKGNVDKLTLAVIKEDATRVAALLSGGVDM 245

Query: 232 VVNLLPEFADSVPQAKSVSGLE---TSVIILGVD---NPAVKDVRVRRALNMAIDRHALA 285
           +  + P     +  AK V       T VI   ++   NPA+KDVRVR+A+  AI+   + 
Sbjct: 246 IAPVSPNDYQRIKDAKGVDLFTMPGTRVITFQMNQNSNPALKDVRVRQAIVYAINNEGIV 305

Query: 286 ESLFAGNAKVTTGQLVLPGAFGYNESLENWPYDPQGAKKLIAEAG-AAGTTIDLVGEAGR 344
           + +  G A  T  Q    G  GYNE+L+   +D   AK+L+ EAG   G  + ++    R
Sbjct: 306 DKVMKG-AATTAAQQSPVGYAGYNENLKP-RFDLNKAKELMKEAGYEKGFNLTMIAPNNR 363

Query: 345 WLKDRELIEAVAAYWTEVGLKVNVEIL-------EFSVYLDRIFDMGNRPDSYFVLNSNE 397
           ++ D ++ +A +A  +++G+KV+++ +       EF      +  +G  PD+    N  E
Sbjct: 364 YVNDEKIAQAASAMLSKIGIKVDLKTMPKAQYWPEFDKCAADMLMIGWHPDTEDSANFTE 423

Query: 398 LFDADREMAFAYEPGQGGAS---NSDKALGEAIRAARSEVDGEKRKAAYAVITKKLHDEA 454
                R+       G+G  +    S+  + + + AA  E D EKR      + + L++EA
Sbjct: 424 FLTMTRDS----NTGKGQYNCGYYSNAEVDKLVNAANEETDLEKRSTMLKKVEEILYNEA 479

Query: 455 YDVPL 459
             VPL
Sbjct: 480 AFVPL 484