Pairwise Alignments

Query, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  223 bits (569), Expect = 4e-63
 Identities = 122/283 (43%), Positives = 172/283 (60%), Gaps = 14/283 (4%)

Query: 28  DKTAAIGLALILLIVFLALFAPLIAP---YDPAAQSIMARLKPPVWMERGTWEHLLGTDN 84
           DK A    A+ +L V +A+ APLIAP   YD ++  IM    PP WME G    LLGTD 
Sbjct: 26  DKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSWMEGGNEHFLLGTDE 85

Query: 85  LGRDVLSRIIWGARATLTIGAVTCLLAATLGTVIGLWAGFMGGRTDSILMRLVDIQVSFP 144
            GRD+ S I++G+R +LTIG +   L  TLG VIGL AG+ GGR DS LMR  DIQ+SF 
Sbjct: 86  QGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDSFLMRFADIQLSFS 145

Query: 145 GILLILLVVAVLGP----------GVWTLVAVLSVTNWMVYARLVRGIVSSTRQTPYVEA 194
            +++ ++V A+              V  LV ++ V  W  YAR VR  V + ++  YVEA
Sbjct: 146 TMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRASVLAEKKKEYVEA 205

Query: 195 AEVIGCRPARVIFRHILPNIVSPLMTLAILEFTNIVLAEAAVSFLGFGVQPPATSWGLDV 254
           A V+G +  R++FRHILPN +SP++ ++ ++  N +++EAA+SFLG G+     S G  +
Sbjct: 206 ARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGLGLPVDQPSLGSLI 265

Query: 255 ASGRDYLFI-AWWLVTFPGLAIVATVLSINLFANWLRVTTDPE 296
           + G  Y+F  AWW+  FPG+ +V  VL INL  +WLR   +P+
Sbjct: 266 SIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPK 308