Pairwise Alignments

Query, 306 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 314 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  197 bits (500), Expect = 3e-55
 Identities = 112/309 (36%), Positives = 174/309 (56%), Gaps = 5/309 (1%)

Query: 1   MLEFILRRLFQGVLVVFGVTATVFVVTRL-VGDPVALMLPLSATEAQRAAFA---QQIGL 56
           M+ F+L+RL   V ++ G +  +F++ RL   DP    L LS       A A   Q++GL
Sbjct: 1   MVSFVLKRLALLVPMLLGASLVIFLMLRLGPSDPAMDYLRLSRIPPTVQALAETRQRLGL 60

Query: 57  DQPIATQFLRFVGDIATLDFGNSLWQRRPAIEVVFERLPNTLLLIAAGLGAAVMLSIPLG 116
           DQP+A Q+  ++     LDFG S    RP +  +   LP TL L    L   + LSIPLG
Sbjct: 61  DQPLAVQYWVWLNKALHLDFGVSYATGRPVLPDLLHYLPATLHLAGVALALTLGLSIPLG 120

Query: 117 AVSALRPGGLVDRLTMSVGLLGLAMPQFWLGLVAIMIFAVTLRWLPTSGMGTAAHLVLPA 176
             +A R   L D++   V  LG++MP FWLG + +++F+V L WLP  G G A H+++PA
Sbjct: 121 MWAARRRDALPDQIVRGVAFLGVSMPNFWLGFLLVLVFSVELGWLPAMGRGGAEHMIMPA 180

Query: 177 LTLALTPLARFTMMVRASMIDELNKPYVKTARAKGLGLTRILRVHTLRNILVPFLSISGW 236
           + +A   L+    ++RASM++   + +V  AR +GL   ++ R H LRN L+P ++ +G 
Sbjct: 181 VAIAFMSLSINARLLRASMLEVSGQRHVYYARLRGLSAAKVERAHILRNALLPIITATGM 240

Query: 237 ELIATLSGYTVVVETVFAWPGLGLTAVQAIQRGDLFLMQAIVFVIAFLIVLIGIALDILS 296
             +  L G T+V+E++F WPG+G  AV AI   D  ++Q    ++  + VL  + +DI+ 
Sbjct: 241 H-VGELIGGTLVIESIFGWPGVGRFAVSAIFNRDYPVIQCFTLLMVLIFVLCNLIVDIVY 299

Query: 297 KAVDPRMEL 305
              DPR+ L
Sbjct: 300 AWADPRIRL 308