Pairwise Alignments

Query, 406 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 458 a.a., carbohydrate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 54.7 bits (130), Expect = 6e-12
 Identities = 75/321 (23%), Positives = 133/321 (41%), Gaps = 49/321 (15%)

Query: 21  AEEIVRISGWGGSEVAIVNGLLTNVLAEKLAEEGIRVKYEPVDG-DYSQFIINGLSAGTA 79
           A E+V I  W   + A+    +  + A + A  GI+VK+ PV   +Y+  +   L AG A
Sbjct: 19  ASELV-IESWRADDKALWEQKI--IPAFEAANPGIKVKFNPVPNVNYTPTLWENLKAGKA 75

Query: 80  PDLFYVDTFW-ARSVFSAGQAAPVTN--DVSGFAANLLTAFTYDG--KLYSIPKDFNTLA 134
            DL     F  + ++F AG  A +T    +  F +     +  D   + + +P       
Sbjct: 76  GDLITCRPFDDSLALFKAGHLAEITEMAGMENFPSFAQAPWQTDSGAQTFCVPMASVIHG 135

Query: 135 IHFNKDIFDDAGVGYPSDDDTWTTLQEKLVAVNKSLP------------EVDGLCVVPEY 182
             +NK IF++ G+  P   + + T+ +K+ A  + +P            E+    + P Y
Sbjct: 136 FFYNKKIFNELGLSVPQTREQFFTVLDKVKADGRYIPLSMSGSESWVASELGYQNIGPNY 195

Query: 183 --ARFGAFALSTGWSPFDARGKTVLDKRFRRAFDFYTGLVKSGAAVMAADA---GHSWTG 237
                G  AL  G    D       D ++ + F+     +    A +  D     +  + 
Sbjct: 196 WKGEDGRLALINGQEHLD-------DSQYVKVFE----ELARWRAYLGEDGELRDYGTSN 244

Query: 238 GCLASERAAVAIEGAWILSALRDSAPNMNLGTVRMPKDPESSKRGNIVF-----SVGWTV 292
               S +AA+ + G+W ++   D    ++ G +R    P  +K+G+  F      +G  +
Sbjct: 245 ELFTSGKAALYVAGSWEIAPFTD---KVDFGVMR----PPVAKQGDGCFFTDHTDIGMGM 297

Query: 293 NAASKVSKAAAKVAELLTTEE 313
           N ASK  +AA    + LTT E
Sbjct: 298 NPASKNPQAAMAFLQWLTTPE 318