Pairwise Alignments

Query, 301 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 290 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  154 bits (389), Expect = 2e-42
 Identities = 87/290 (30%), Positives = 159/290 (54%), Gaps = 14/290 (4%)

Query: 20  LSDIKIRNLFIIPTILFLIVFNIFPLIYSLGYSFTDFRASTNAPAT---FVGLQNYR-EL 75
           + D  ++   ++P ++ +    I+PLI +   SFT  R   N P +   ++G +NY    
Sbjct: 1   MRDNTLKYFLVLPAVVVVFATAIWPLIEAARMSFTVGRL--NRPGSLEQYIGWENYAWAF 58

Query: 76  LNDPFIWANFAITAKYVIVSVTGQVVVGFGTAMLLNREIPFKGLITTLLLLPMMLSMAVV 135
             +P  W +  +TA Y +V+V    ++  G A+LL      +    TLL+LP  +S A++
Sbjct: 59  FEEPAFWNSVYVTALYTVVTVGLTTLLALGLALLLAPGGRLRVSAQTLLILPFAMSPALI 118

Query: 136 GLFWKLLYDPSFGIINYALG-----LGSFEWLANPEMALYAVAITDIWMWSPFVMLLSLA 190
           G+ ++ +++P FG+ +   G     L    WLA+P +A   V + D+W W PF+ L+ + 
Sbjct: 119 GVSFRFMFNPEFGLFDAFFGVMIPPLADVSWLADPTLAFAVVVMADVWGWIPFLTLVLIG 178

Query: 191 GLSAVPRHLYEAAAIDRAGPFYTFFRITLPLVAPILMIAIIFRTMEAFKTFDLAYILTS- 249
           GL++VPR   EAA +D A  +  F  +TLP + P+L + II +++ + KTFD  ++LT+ 
Sbjct: 179 GLASVPRDTIEAAQVDGASSWRVFRDVTLPQLGPVLAVVIILKSIFSLKTFDQVFMLTNG 238

Query: 250 --QPTTEVISIRLYKMAFQEWQTGRSCALAYIVLIMVLAITNIYVKYLNR 297
                T+ +S  +Y    +  Q G S ++A++++I ++ +T  Y K++ R
Sbjct: 239 GPGTATQTLSHYIYFNGMKYGQIGYSASVAWLMVIPMIFLTYAYAKFVFR 288