Pairwise Alignments

Query, 435 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 580 a.a., Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) from Pseudomonas fluorescens FW300-N2E2

 Score = 84.7 bits (208), Expect = 7e-21
 Identities = 105/439 (23%), Positives = 167/439 (38%), Gaps = 50/439 (11%)

Query: 43  LVNEYEAETGVKVTVETTPWADFQTKAFTEFNAKGSAYDMVVGDSQWIGAASEAGHYVDL 102
           L   +   TG+++T +     D   K  T+  +  + YD  V DS  IG     G    +
Sbjct: 90  LAKAFSEITGIQLTHDLLQEGDVVEKLQTQMQSDKNIYDGWVNDSDLIGTHFRYGKTESI 149

Query: 103 TEFFNQHKLNEVMAPATVKYY---SEYPANSGKYWSIPAEGDAVGWSYRKDWFEDPKEME 159
           T+       +       +K +   S   A  GK + +P +  A  + +R DWFE      
Sbjct: 150 TDLMANEGKDFTSPTLDLKDFIGISFTTAPDGKVYQLPDQQFANLYWFRADWFERADLKA 209

Query: 160 AFKAKYGYDLAPPKDWKQLRDIAEFFHRPDQKRYGIAIYTDNSY----DGLVMGVENAIF 215
            FK KYGY+L  P +W    DIA+FF    ++  G  +Y    Y      L     +A F
Sbjct: 210 KFKEKYGYELGVPVNWSAYEDIAKFFSEDVKEIDGKRVYGHMDYGKKDPSLGWRFTDAWF 269

Query: 216 SF--GGELGDYSTYKVD-------------------GIINSEKNVKALEAYRE-LYGFTP 253
           S   GG+ G  +   VD                   G  N    V A   Y + +  + P
Sbjct: 270 SMAGGGDKGLPNGLPVDEWGIRVEDCHPVGSSVTRGGDTNGPAAVFATTKYVDWMKKYAP 329

Query: 254 PGWAKSFFVENNQAITENLAAMSMNYFAFFPALVNEASNPNAKVTG-----FFANPAGPE 308
           P  A   F E+    ++   A  + ++  F A + +   P     G        +P GP 
Sbjct: 330 PEAAGMTFSESGPVPSQGNIAQQIFWYTAFTADMTKPGLPVVNADGTPKWRMAPSPRGPY 389

Query: 309 GDQYAALGGQGISIVSYSENKEEAIKFLEW----FVKDETQKRWAELGGYTASAKV-LES 363
            ++   LG Q +   ++ ++  E  K   W    FV  +T      + G T   +  + S
Sbjct: 390 WEEGMKLGYQDVGSWTFMKSTPEKQKLAAWLYAQFVTSKTVSLKKTIVGLTPIRESDINS 449

Query: 364 EEFQNATPYNKA---FYETMFRVKDFWA-----TPEYAELLIQMNQRIYPYVTAGQGTAK 415
           +   +  P       FY +  RV+  W       P+Y   L Q+         +G+ T +
Sbjct: 450 QALTDLAPKLGGLVEFYRSPARVQ--WTPTGTNVPDYPR-LAQLWWSHIAEAASGEKTPQ 506

Query: 416 EALDALAKDWNATFKKYGR 434
           +ALD LAKD +A   +  R
Sbjct: 507 QALDGLAKDQDAIMTRLER 525