Pairwise Alignments

Query, 166 a.a., NapF ferredoxin component of periplasmic nitrate reductase from Sinorhizobium meliloti 1021

Subject, 553 a.a., (Fe-S)-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 24  VSPPGATAEGLEA-CTGCGRCADACPTHIIRVIDDRPALDFFIAECTFCGQCAELCPEPV 82
           +S P  T E   + CT C  C   CPT  + +  D PAL F   +C  CG C + CPE V
Sbjct: 406 ISAPYGTIECQTSDCTLCMSCVAVCPTRALHLAGDSPALRFIEQDCVQCGLCVKACPEQV 465

Query: 83  FTGRSQ 88
            +   Q
Sbjct: 466 LSATPQ 471



 Score = 39.3 bits (90), Expect = 1e-07
 Identities = 18/53 (33%), Positives = 24/53 (45%)

Query: 102 ARNRTDCQACRDACPTEAIRFRPRAGGPFLPELNEELCTGCGACLSVCPVAAI 154
           +R    C+ C DACP  A+            ++N  LC G G C + CP  AI
Sbjct: 180 SRGVKGCERCVDACPAGALSSEGSEQTGHRIQINPYLCQGVGTCATACPTEAI 232



 Score = 37.0 bits (84), Expect = 6e-07
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 4/66 (6%)

Query: 100 CLARNRTDCQACRDACPTEAIRFRPRAGGPFLPELNEELCTGCGACLSVCPVAAIGIR-E 158
           C   + T C +C   CPT A+     AG        E+ C  CG C+  CP   +    +
Sbjct: 415 CQTSDCTLCMSCVAVCPTRALHL---AGDSPALRFIEQDCVQCGLCVKACPEQVLSATPQ 471

Query: 159 VEWERA 164
           + W +A
Sbjct: 472 LNWNKA 477



 Score = 28.9 bits (63), Expect = 1e-04
 Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 7/58 (12%)

Query: 27  PGATAEGLEACTGCGRCADACPTHII-----RVIDDRPALDFFIAECTFCGQCAELCP 79
           P   A       GC RC DACP   +          R  ++ ++  C   G CA  CP
Sbjct: 173 PDLCAHSSRGVKGCERCVDACPAGALSSEGSEQTGHRIQINPYL--CQGVGTCATACP 228



 Score = 28.9 bits (63), Expect = 1e-04
 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 11/56 (19%)

Query: 71  CGQCAELCPEPVFTGR-SQQFPHVAMIGESCLARNRTDCQA---CRDACPTEAIRF 122
           C +C + CP    +   S+Q  H   I       N   CQ    C  ACPTEAI +
Sbjct: 186 CERCVDACPAGALSSEGSEQTGHRIQI-------NPYLCQGVGTCATACPTEAIHY 234



 Score = 26.9 bits (58), Expect = 6e-04
 Identities = 10/16 (62%), Positives = 10/16 (62%)

Query: 37  CTGCGRCADACPTHII 52
           C G G CA ACPT  I
Sbjct: 217 CQGVGTCATACPTEAI 232