Pairwise Alignments
Query, 166 a.a., NapF ferredoxin component of periplasmic nitrate reductase from Sinorhizobium meliloti 1021
Subject, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Score = 63.2 bits (152), Expect = 6e-15
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 16/120 (13%)
Query: 37 CTGCGRCADACPTHIIRVIDDRPALDFFIAECTFCGQCAELCPEPVFTGRSQQFPHVAMI 96
C CG C D CP++ +R + + D CT C C + CP+ V + + +
Sbjct: 266 CINCGLCVDKCPSNALRFENGKILYD--PKTCTLCNTCVKECPQGVRINKGE------FV 317
Query: 97 GESCLARNRTDCQACRDACPTEAIRFRPRAGGPFLPELNEELCTGCGACLSVCPVAAIGI 156
C+ C+ C CP +AI + R+ +++E C CG C VCP AI +
Sbjct: 318 DGGCVL-----CELCIKECPEDAISIKERSK---FTSIDKEECIACGTCSMVCPNDAITV 369
Score = 59.7 bits (143), Expect = 7e-14
Identities = 43/137 (31%), Positives = 56/137 (40%), Gaps = 29/137 (21%)
Query: 35 EACTGCGRCADACPTHIIRVIDDRPALDF----------FIAECTFCGQCAELCPEPVFT 84
E C CG C+ CP I V+ D +L+F F C C +CA CP V
Sbjct: 350 EECIACGTCSMVCPNDAITVVID--SLNFSGNKVHSKVIFNDNCVICEKCAIHCPRDVIE 407
Query: 85 GRSQQFPHVAMIG-ESCLARNRTD----CQACRDACPTEAIRFRPRAGGPFLPELNEELC 139
S H ++ E+ R D C C CP +AI E+N E C
Sbjct: 408 NTSG---HKKVVDRENSYIRTDNDYCVKCGLCTIICPNDAID---------KGEINTEKC 455
Query: 140 TGCGACLSVCPVAAIGI 156
C AC+++CP AI I
Sbjct: 456 EYCSACVNICPTRAIRI 472
Score = 55.8 bits (133), Expect = 1e-12
Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 21/124 (16%)
Query: 35 EACTGC-----GRCADACPTHIIRVIDDRPALDFFIAECTFCGQCAELCPEPVFTGRSQQ 89
E C C +C + CPT+ I++ID + C CG CA+ CP + +
Sbjct: 13 EECEDCKNKEISKCMEVCPTNAIKMIDGK------AFSCITCGTCAKECPTGAI--KKNE 64
Query: 90 FPHVAMIGESCLARNRTDCQACRDACPTEAIRFRPRAGGPFLPELNEELCTGCGACLSVC 149
+ + + C T C C++ CP + I R + G P +C CG C + C
Sbjct: 65 YGGYYVNRKLC-----TGCGICKNVCPIDIIDIREDSTGKSYP---TGMCVMCGLCTTEC 116
Query: 150 PVAA 153
P A
Sbjct: 117 PYNA 120
Score = 53.1 bits (126), Expect = 6e-12
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 12/120 (10%)
Query: 31 AEGLEACTGCGRCADACPTHIIRVIDDRPALDFFIAECTFCGQCAELCPEPVFTGRSQQF 90
AE ++ CT C C + CP I C CG C CP+ V +
Sbjct: 199 AEMVDGCTRCNICNEVCPVDAIE-------YGQVTENCILCGNCISKCPKDVLEISEFKV 251
Query: 91 PHVAMIGESCLARNRTDCQACRDACPTEAIRFRPRAGGPFLPELNEELCTGCGACLSVCP 150
++ ++ +C C D CP+ A+RF G L + + CT C C+ CP
Sbjct: 252 VKTKEDVKAKPEKHCINCGLCVDKCPSNALRFE---NGKIL--YDPKTCTLCNTCVKECP 306
Score = 49.7 bits (117), Expect = 7e-11
Identities = 41/184 (22%), Positives = 59/184 (32%), Gaps = 72/184 (39%)
Query: 37 CTGCGRCADACPTHIIRVIDDRPALDFFIAECTFCGQCAELCP----------------- 79
CTGCG C + CP II + +D + C CG C CP
Sbjct: 75 CTGCGICKNVCPIDIIDIREDSTGKSYPTGMCVMCGLCTTECPYNARLYFDPSSLKNTKN 134
Query: 80 -------EPVFT--GRSQQFP---HVAMI--------------GESCLARNR-------- 105
+F G++ +FP HV ++ + C+ +
Sbjct: 135 KMLMERYSTIFKMMGKTYEFPEPKHVKIVKPAERKLRHSISIDSKKCVECGKCIYLCPKD 194
Query: 106 -----------TDCQACRDACPTEAIRFRPRAGGPFLPELNEELCTGCGACLSVCPVAAI 154
T C C + CP +AI + E C CG C+S CP +
Sbjct: 195 TIIEAEMVDGCTRCNICNEVCPVDAIEYGQVT----------ENCILCGNCISKCPKDVL 244
Query: 155 GIRE 158
I E
Sbjct: 245 EISE 248
Score = 46.2 bits (108), Expect = 8e-10
Identities = 33/136 (24%), Positives = 49/136 (36%), Gaps = 11/136 (8%)
Query: 37 CTGCGRCADACPTHIIRVIDDRPALDFFIAECTFCGQCAELCPEPVFTG--RSQQFPHVA 94
C C C CP I + + EC CG C+ +CP T S F
Sbjct: 321 CVLCELCIKECPEDAISIKERSKFTSIDKEECIACGTCSMVCPNDAITVVIDSLNFSGNK 380
Query: 95 MIGESCLARNRTDCQACRDACPTEAIRFRPRAGGPFLPE-------LNEELCTGCGACLS 147
+ + N C+ C CP + I +G + + + + C CG C
Sbjct: 381 VHSKVIFNDNCVICEKCAIHCPRDVIE--NTSGHKKVVDRENSYIRTDNDYCVKCGLCTI 438
Query: 148 VCPVAAIGIREVEWER 163
+CP AI E+ E+
Sbjct: 439 ICPNDAIDKGEINTEK 454
Score = 43.5 bits (101), Expect = 5e-09
Identities = 29/121 (23%), Positives = 43/121 (35%), Gaps = 23/121 (19%)
Query: 37 CTGCGRCADACPTHIIRVIDDRPALDFFIAECTFCGQCAELCPEPVFTGRSQQFPHVAMI 96
C CG+C CP I + + CT C C E+CP +
Sbjct: 181 CVECGKCIYLCPKDTIIEAE-------MVDGCTRCNICNEVCPVDAI--------EYGQV 225
Query: 97 GESCLARNRTDCQACRDACPTEAIR---FRPRAGGPFLPELNEELCTGCGACLSVCPVAA 153
E+C+ C C CP + + F+ + E+ C CG C+ CP A
Sbjct: 226 TENCIL-----CGNCISKCPKDVLEISEFKVVKTKEDVKAKPEKHCINCGLCVDKCPSNA 280
Query: 154 I 154
+
Sbjct: 281 L 281