Pairwise Alignments

Query, 166 a.a., NapF ferredoxin component of periplasmic nitrate reductase from Sinorhizobium meliloti 1021

Subject, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 52.4 bits (124), Expect = 4e-12
 Identities = 35/130 (26%), Positives = 50/130 (38%), Gaps = 17/130 (13%)

Query: 35  EACTGCGRCADACPTHIIRVIDDRPALDFFIAECTFCGQCAELCPEPVF--TGRSQQFPH 92
           E C  C RC + CP  +  +  + P +     +C +C  C E CP      T    +  +
Sbjct: 36  EICILCNRCLEVCP--VTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIKITKTRVRVEN 93

Query: 93  VAMIGESCLARNRTD--------CQACRDACPTEAIRFRPRAGGPFLPELNEELCTGCGA 144
             +I E+ L   + D        C  C   CP EAI     +        N + C  CG 
Sbjct: 94  GNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAI-----SESDDTISFNMDKCVLCGH 148

Query: 145 CLSVCPVAAI 154
           C  +CP  AI
Sbjct: 149 CEEICPAKAI 158



 Score = 37.7 bits (86), Expect = 9e-08
 Identities = 23/101 (22%), Positives = 37/101 (36%), Gaps = 24/101 (23%)

Query: 37  CTGCGRCADACPTHIIRVIDDR----------------PALDFFIAECTFCGQCAELCPE 80
           C  C  C + CP   I++   R                  LD+   +C  C  C + CP 
Sbjct: 67  CVYCNTCVETCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCP- 125

Query: 81  PVFTGRSQQFPHVAMIGESCLARNRTDCQACRDACPTEAIR 121
             F   S+    ++   + C+      C  C + CP +AI+
Sbjct: 126 --FEAISESDDTISFNMDKCVL-----CGHCEEICPAKAIK 159



 Score = 33.9 bits (76), Expect = 1e-06
 Identities = 13/22 (59%), Positives = 15/22 (68%)

Query: 133 ELNEELCTGCGACLSVCPVAAI 154
           E+N E+C  C  CL VCPV AI
Sbjct: 32  EINPEICILCNRCLEVCPVTAI 53



 Score = 25.0 bits (53), Expect = 6e-04
 Identities = 7/21 (33%), Positives = 12/21 (57%)

Query: 34  LEACTGCGRCADACPTHIIRV 54
           ++ C  CG C + CP   I++
Sbjct: 140 MDKCVLCGHCEEICPAKAIKL 160