Pairwise Alignments
Query, 166 a.a., NapF ferredoxin component of periplasmic nitrate reductase from Sinorhizobium meliloti 1021
Subject, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Score = 59.7 bits (143), Expect = 5e-14
Identities = 41/147 (27%), Positives = 60/147 (40%), Gaps = 25/147 (17%)
Query: 34 LEACTGCGRCADACPTHIIRVIDDRPALDFFIAE-----------------CTFCGQCAE 76
L+AC C C ACP + I I + L I + C CG CA
Sbjct: 191 LDACVYCKVCEKACPHNAIEAICYKCPLASKIKKPELYGEIKGQTNIDKELCVSCGWCAN 250
Query: 77 LCPEPVFTGRSQQFPHVAMIGESCLARNRTDCQACRDACPTEAIRF-RPRAGGPFLPEL- 134
+CP + + +C A C AC CP A+ F +P G +P +
Sbjct: 251 ICPADAIEVEKPFEGELIIDEPACNA-----CGACISVCPCNALVFPQPEKQGDKVPNVV 305
Query: 135 -NEELCTGCGACLSVCPVAAIGIREVE 160
N+++C CGAC CPV A+ ++ +
Sbjct: 306 VNQDVCILCGACTHSCPVDALTVKRTK 332
Score = 58.5 bits (140), Expect = 1e-13
Identities = 39/138 (28%), Positives = 57/138 (41%), Gaps = 22/138 (15%)
Query: 37 CTGCGRCADACPTHIIRVIDD-------RPALDFFIA--ECTFCGQCAELCPEPVFTGRS 87
C CG CA+ CP I +I + P D I C +C C + CP
Sbjct: 154 CVLCGICAEYCPADAIELIPNDMNALSLNPIADIKIDLDACVYCKVCEKACPHNAIEAIC 213
Query: 88 QQFPHVAMIGESCL---ARNRTD--------CQACRDACPTEAIRFRPRAGGPFLPELNE 136
+ P + I + L + +T+ C C + CP +AI G + ++E
Sbjct: 214 YKCPLASKIKKPELYGEIKGQTNIDKELCVSCGWCANICPADAIEVEKPFEGELI--IDE 271
Query: 137 ELCTGCGACLSVCPVAAI 154
C CGAC+SVCP A+
Sbjct: 272 PACNACGACISVCPCNAL 289
Score = 51.2 bits (121), Expect = 2e-11
Identities = 42/151 (27%), Positives = 62/151 (41%), Gaps = 33/151 (21%)
Query: 37 CTGCGRCADACPTHIIRVIDDRPALDFFIA--------ECTFCGQCAELCPEPVFTGRSQ 88
C C +C CP I V + P + +C CG CAE CP +
Sbjct: 115 CVLCEQCELVCPQCAIDVEREVPERKSLVLGEITIKKDDCVLCGICAEYCPADAI----E 170
Query: 89 QFPH-VAMIGESCLARNRTD------CQACRDACP---TEAIRFR-PRAGGPFLPEL--- 134
P+ + + + +A + D C+ C ACP EAI ++ P A PEL
Sbjct: 171 LIPNDMNALSLNPIADIKIDLDACVYCKVCEKACPHNAIEAICYKCPLASKIKKPELYGE 230
Query: 135 -------NEELCTGCGACLSVCPVAAIGIRE 158
++ELC CG C ++CP AI + +
Sbjct: 231 IKGQTNIDKELCVSCGWCANICPADAIEVEK 261
Score = 50.8 bits (120), Expect = 2e-11
Identities = 42/142 (29%), Positives = 54/142 (38%), Gaps = 28/142 (19%)
Query: 37 CTGCGRCADACPTHIIRVID---------DRPALDFFIAECTFCGQCAELCP-------- 79
C GCG C++ CPT I + D P LD +C CG CA CP
Sbjct: 32 CVGCGICSEICPTSAIEMGPLGAIFKGDIDAPKLD-ISEKCVLCGMCACACPFDAVKLSI 90
Query: 80 --EPVFTGRSQQFPHVAMIGESCLARNRTDCQACRDACPTEAI---RFRPRAGGPFLPE- 133
+P+ Q+P + G C+ C CP AI R P L E
Sbjct: 91 NDKPI--TEMPQYPKIKR-GIELNQSKCVLCEQCELVCPQCAIDVEREVPERKSLVLGEI 147
Query: 134 -LNEELCTGCGACLSVCPVAAI 154
+ ++ C CG C CP AI
Sbjct: 148 TIKKDDCVLCGICAEYCPADAI 169
Score = 50.1 bits (118), Expect = 4e-11
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 21/141 (14%)
Query: 35 EACTGCGRCADACPTHIIRV-IDDRP------------ALDFFIAECTFCGQCAELCPE- 80
E C CG CA ACP +++ I+D+P ++ ++C C QC +CP+
Sbjct: 69 EKCVLCGMCACACPFDAVKLSINDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCPQC 128
Query: 81 PVFTGRSQQFPHVAMIGESCLARNR-TDCQACRDACPTEAIRFRPR-----AGGPFLP-E 133
+ R ++GE + ++ C C + CP +AI P + P +
Sbjct: 129 AIDVEREVPERKSLVLGEITIKKDDCVLCGICAEYCPADAIELIPNDMNALSLNPIADIK 188
Query: 134 LNEELCTGCGACLSVCPVAAI 154
++ + C C C CP AI
Sbjct: 189 IDLDACVYCKVCEKACPHNAI 209
Score = 48.5 bits (114), Expect = 1e-10
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 25/106 (23%)
Query: 28 GATAEGLEACTGCGRCADACPTHIIRV--------IDDRPALDFFIAECTFCGQCAELCP 79
G T E C CG CA+ CP I V I D PA C CG C +CP
Sbjct: 233 GQTNIDKELCVSCGWCANICPADAIEVEKPFEGELIIDEPA-------CNACGACISVCP 285
Query: 80 -----EPVFTGRSQQFPHVAMIGESCLARNRTDCQACRDACPTEAI 120
P + + P+V + + C+ C AC +CP +A+
Sbjct: 286 CNALVFPQPEKQGDKVPNVVVNQDVCIL-----CGACTHSCPVDAL 326
Score = 43.9 bits (102), Expect = 3e-09
Identities = 36/114 (31%), Positives = 47/114 (41%), Gaps = 31/114 (27%)
Query: 68 CTFCGQCAELCPEPVFTGRSQQFPHVAM-----------IGESCLARNRTDCQACRDACP 116
C CG C+E+CP T + P A+ I E C+ C C ACP
Sbjct: 32 CVGCGICSEICP----TSAIEMGPLGAIFKGDIDAPKLDISEKCVL-----CGMCACACP 82
Query: 117 TEAIRF----RPRAGGPFLP------ELNEELCTGCGACLSVCPVAAIGI-REV 159
+A++ +P P P ELN+ C C C VCP AI + REV
Sbjct: 83 FDAVKLSINDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCPQCAIDVEREV 136