Pairwise Alignments

Query, 834 a.a., nitrate reductase catalytic subunit from Sinorhizobium meliloti 1021

Subject, 826 a.a., periplasmic nitrate reductase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1148 bits (2969), Expect = 0.0
 Identities = 548/827 (66%), Positives = 647/827 (78%), Gaps = 5/827 (0%)

Query: 5   LTRREMLKAHAAGIAAATAGIALPAAAQPVPGGVEALQITWSKAPCRFCGTGCGVMVGVK 64
           ++RRE LKA+AA  AA   G+ LP     +    E+  I W KAPCRFCG GC V+VG K
Sbjct: 3   ISRREFLKANAAVAAATAVGVTLPVK---MVEAAESDNIKWDKAPCRFCGVGCSVLVGTK 59

Query: 65  EGQVVATHGDMQAEVNRGLNCIKGYFLSKIMYGTDRLKTPLLRKRNGAFAKDGEFEPVSW 124
            G+VVAT GD ++ VNRGLNCIKGYFLSKIMYG DRL TPLLR ++G + K+GEF PVSW
Sbjct: 60  AGKVVATKGDPESPVNRGLNCIKGYFLSKIMYGKDRLTTPLLRMKDGKYHKEGEFTPVSW 119

Query: 125 DEAFDVMAEQAKKVLKDKGPTAVGMFGSGQWTIFEGYAATKLMRAGFRSNNLDPNARHCM 184
           D AFD MA + K  +  KGPT+VGMFGSGQWTI+EGYAA+KL +AGF +NN+DPNARHCM
Sbjct: 120 DVAFDTMAAKWKHSIATKGPTSVGMFGSGQWTIWEGYAASKLHKAGFLTNNIDPNARHCM 179

Query: 185 ASAAYAFMRTFGMDEPMGCYDDFEHADAFVLWGSNMAEMHPILWTRLADRRLGHEHVKVA 244
           ASA   FMRTFG+DEPMGCYDD E AD FVLWG+NMAEMHPILW RL+DRRL  +  +V 
Sbjct: 180 ASAVVGFMRTFGIDEPMGCYDDLEAADHFVLWGANMAEMHPILWARLSDRRLSSKDCRVH 239

Query: 245 VLSTFTHRSMDLADIPIVFKPGTDLAILNYIANHIIQTGRVNEDFVRKHTTFMVGATDIG 304
           VLSTF +RS DLAD P+VF P +DL ILNYIAN+IIQ   VN DFV KHT F +G  DIG
Sbjct: 240 VLSTFENRSFDLADNPMVFHPQSDLVILNYIANYIIQNKAVNTDFVTKHTKFALGVDDIG 299

Query: 305 YGLRPDNPLEVKAVNAKDAAKMTPSDFESFKSFVSEYTLDKVVELTGVEAGFLEQLADLY 364
           YGLRPD+PLE KA N  +  K TP  F+ +  FVS YTL+   +++GVE   LE LA  Y
Sbjct: 300 YGLRPDHPLEKKAKNPGNG-KSTPISFDEYAKFVSTYTLEYAAKMSGVEPEKLETLAKAY 358

Query: 365 ADPKRKVMSLWTMGFNQHVRGVWVNQMVYNLHLLTGKISEPGNSPFSLTGQPSACGTARE 424
           ADPK KVMSLWTMG NQHVRGVW N M+YN+HLLTGKI+ PGNSPFSLTGQPSACGTARE
Sbjct: 359 ADPKAKVMSLWTMGINQHVRGVWANNMLYNIHLLTGKIATPGNSPFSLTGQPSACGTARE 418

Query: 425 VGTFAHRLPADMTVTNPEHRKHAEEIWRIPHGIIPEKPGYHAVEQDRMLKDGKLNFYWVQ 484
           VGTFAHRLPADM V N +HR   E++W++P G IP KPGYHAV Q RMLKDGKLN YW  
Sbjct: 419 VGTFAHRLPADMVVDNDKHRAITEKMWQVPEGTIPPKPGYHAVLQSRMLKDGKLNCYWTM 478

Query: 485 VNNNVQAAPNTQNETYQGYRNPDNFIVVSDVYPTITAMSADLILPAAMWVEKEGAYGNAE 544
             NN+QA PN   E Y G+RNP+NFIVVSD YPT+TAM+ADLILP AMWVEKEGAYGNAE
Sbjct: 479 CTNNMQAGPNINEEMYPGFRNPENFIVVSDPYPTVTAMAADLILPTAMWVEKEGAYGNAE 538

Query: 545 RRTHVWHQLVDAPGEARSDLWQMVEFSKRFTTDEVWSTDILDANPGYRGKTLYDVLFKNG 604
           RRTH+WHQ V AP  A+SDLWQ+VEFSKRF   EVW  +++   P Y  KTLY+VLF NG
Sbjct: 539 RRTHMWHQQVKAPEGAKSDLWQLVEFSKRFKVAEVWPAELIAKKPEYADKTLYEVLFANG 598

Query: 605 NVDSFPASEINKEYANREAEAFGFYIQKGLFEEYASFGRGHGHDLAPYDRYHDERGLRWP 664
            ++ FP ++  K   N E+E F FY+QKG+FEEYA+FGRGHGHDLA +DRYH+ RGLRWP
Sbjct: 599 VINKFPTTDC-KGDLNDESEHFSFYVQKGIFEEYAAFGRGHGHDLAEFDRYHETRGLRWP 657

Query: 665 VVDGKETLWRYREGYDPYVKPGEGVKFYGRPDGKAVILAVPYEPPAESPDDEYNVWLVTG 724
           VV+ KETL R+ EG DPYVK GEG  FYG+PDGKAVI A+PYEP AE P+ EY++W+ TG
Sbjct: 658 VVNDKETLRRFVEGSDPYVKAGEGYNFYGKPDGKAVIFALPYEPAAEEPNSEYDLWMSTG 717

Query: 725 RVLEHWHSGSMTMRVPELYKAFPGAVCFMNAGDARDRGINQGAEVRIVSRRGEIRARVET 784
           RVLEHWH+GSMT RVPELY+A+P A  FM+  DA+ RG+ +G EV + S RGEI+ RVET
Sbjct: 718 RVLEHWHTGSMTARVPELYRAYPDAQIFMHPEDAKARGLQRGDEVLVASPRGEIKTRVET 777

Query: 785 RGRNRMPPGVIFVPWFDASRLINKVTLDATDPISKQTDFKKCAVKIV 831
           +GRN+ P GV+F+P+FDA +L+NK+ LDATDP+SK+TDFKKC VK++
Sbjct: 778 KGRNKPPRGVVFMPFFDARQLVNKLILDATDPLSKETDFKKCPVKVM 824