Pairwise Alignments

Query, 372 a.a., Protease from Sinorhizobium meliloti 1021

Subject, 337 a.a., site-2 protease family protein from Methanococcus maripaludis S2

 Score =  150 bits (380), Expect = 4e-41
 Identities = 104/326 (31%), Positives = 172/326 (52%), Gaps = 31/326 (9%)

Query: 4   SLKLGTIAGTEIRIHMTFVLLLVWIWFTHYQIGGAPAAW--EGVAFILSVFVCVVLHEFG 61
           S K+  + G  I +H+TF+LLL+ +++           W  EG+   + +F  VVLHE G
Sbjct: 3   SFKIARVMGIPIELHITFILLLIVVFYF----------WGIEGLILYMFLFTSVVLHELG 52

Query: 62  HIAAARRFGIKTPDITLLPIGGVARLERNPSEPREELLIAVAGPLVNVVIAALLIAVIGG 121
           H   A+++G+K   I LLPIGG+A +     E   E  IA+AGPLV++ +  +L+    G
Sbjct: 53  HSYVAKKYGVKIEKILLLPIGGMAMMSEISKE--GEFKIAIAGPLVSLALGTVLL----G 106

Query: 122 VAGLEQLVRPQDPQIDFFVRLAGVNIFLVLFNMIPAFPMDGGRVLRAILAWRWSLE--RA 179
           ++ +      + P    F  + G+NI L +FN++PAFPMDGGRV RA+L+   S+   +A
Sbjct: 107 ISTVTDYTLAEYP---LFQTVGGLNILLGIFNLLPAFPMDGGRVFRALLSKLTSMSYIKA 163

Query: 180 TRVAATIGQGTAFVMGVAGLF-YSPLLILIAIFVYLAAESEAQSSELQAI--SVTVGDVM 236
           T++A+T+GQ  A  + + GL  ++ +L+LIAIF+Y  A  E ++     +   V   D+M
Sbjct: 164 TKLASTVGQYFALALLIFGLINFNVILVLIAIFIYFGASQEYRALVADTLFQDVPAKDIM 223

Query: 237 LTEFGVLQSDARLSEAAELLLATSQNEFPVVDGEGQFAGLLTRDGIIGAMKEGGPNALVG 296
                 + S+  + +   L+L      +PV++  G   G +T + I     +    A V 
Sbjct: 224 SKNIVYVNSEDTVDDVLNLMLENRFLGYPVLE-NGNIIGTITMNEISSTTAK---TAKVK 279

Query: 297 TVMRTDIPWVYEETALGDSLRVMQTT 322
            +M   +  V  E AL + ++ M  T
Sbjct: 280 EIMSPPV-MVSPEAALNELIKGMANT 304